Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 RBBP4P5-201ENST00000398583 1266 ntBASIC6.34□□□□□ -1.39
LIMK2P53671 AL157884.1-201ENST00000424561 454 ntBASIC6.34□□□□□ -1.39
LIMK2P53671 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LIMK2P53671 AC083862.1-201ENST00000427378 1242 ntBASIC6.34□□□□□ -1.39
LIMK2P53671 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.34□□□□□ -1.39
LIMK2P53671 GTF3AP6-201ENST00000432585 986 ntBASIC6.34□□□□□ -1.39
LIMK2P53671 RN7SL552P-201ENST00000462094 276 ntBASIC6.34□□□□□ -1.39
LIMK2P53671 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.34□□□□□ -1.39
LIMK2P53671 AC091874.2-201ENST00000505889 720 ntBASIC6.34□□□□□ -1.39
LIMK2P53671 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
LIMK2P53671 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.34□□□□□ -1.39
LIMK2P53671 AC084121.1-201ENST00000533882 835 ntBASIC6.34□□□□□ -1.39
LIMK2P53671 TOMM20P1-201ENST00000534518 427 ntBASIC6.34□□□□□ -1.39
LIMK2P53671 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.34□□□□□ -1.39
LIMK2P53671 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.34□□□□□ -1.39
LIMK2P53671 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LIMK2P53671 AC007494.1-201ENST00000562293 760 ntBASIC6.34□□□□□ -1.39
LIMK2P53671 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.34□□□□□ -1.39
LIMK2P53671 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.34□□□□□ -1.39
LIMK2P53671 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.34□□□□□ -1.39
LIMK2P53671 AP001052.1-201ENST00000626421 99 ntBASIC6.34□□□□□ -1.39
LIMK2P53671 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
LIMK2P53671 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
LIMK2P53671 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LIMK2P53671 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC6.34□□□□□ -1.39
LIMK2P53671 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LIMK2P53671 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LIMK2P53671 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
LIMK2P53671 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK2P53671 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK2P53671 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK2P53671 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK2P53671 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK2P53671 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.33□□□□□ -1.4
LIMK2P53671 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK2P53671 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK2P53671 SNORD16-201ENST00000362803 99 ntBASIC6.33□□□□□ -1.4
LIMK2P53671 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
LIMK2P53671 RN7SKP281-201ENST00000410472 352 ntBASIC6.33□□□□□ -1.4
LIMK2P53671 RPL23AP18-201ENST00000416139 468 ntBASIC6.33□□□□□ -1.4
LIMK2P53671 AC007562.1-201ENST00000421819 517 ntBASIC6.33□□□□□ -1.4
LIMK2P53671 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.33□□□□□ -1.4
LIMK2P53671 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.33□□□□□ -1.4
LIMK2P53671 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.33□□□□□ -1.4
LIMK2P53671 AC023274.2-201ENST00000445264 521 ntBASIC6.33□□□□□ -1.4
LIMK2P53671 AC114728.1-201ENST00000488289 483 ntBASIC6.33□□□□□ -1.4
LIMK2P53671 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.33□□□□□ -1.4
LIMK2P53671 AC018645.1-201ENST00000505003 109 ntBASIC6.33□□□□□ -1.4
LIMK2P53671 MAST4-IT1-201ENST00000514241 658 ntBASIC6.33□□□□□ -1.4
LIMK2P53671 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC6.33□□□□□ -1.4
LIMK2P53671 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.33□□□□□ -1.4
LIMK2P53671 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.33□□□□□ -1.4
LIMK2P53671 AL078601.3-201ENST00000573303 535 ntBASIC6.33□□□□□ -1.4
LIMK2P53671 AC026898.1-201ENST00000586404 571 ntBASIC6.33□□□□□ -1.4
LIMK2P53671 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK2P53671 MIR6778-201ENST00000617912 73 ntBASIC6.33□□□□□ -1.4
LIMK2P53671 LINC02495-203ENST00000636704 242 ntBASIC6.33□□□□□ -1.4
LIMK2P53671 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.33□□□□□ -1.4
LIMK2P53671 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK2P53671 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.33□□□□□ -1.4
LIMK2P53671 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK2P53671 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK2P53671 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK2P53671 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
LIMK2P53671 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK2P53671 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
LIMK2P53671 AC125238.2-201ENST00000430003 1440 ntBASIC6.33□□□□□ -1.4
LIMK2P53671 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK2P53671 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LIMK2P53671 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
LIMK2P53671 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
LIMK2P53671 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LIMK2P53671 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.32□□□□□ -1.4
LIMK2P53671 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.32□□□□□ -1.4
LIMK2P53671 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.32□□□□□ -1.4
LIMK2P53671 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
LIMK2P53671 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LIMK2P53671 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LIMK2P53671 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
LIMK2P53671 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LIMK2P53671 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
LIMK2P53671 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
LIMK2P53671 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
LIMK2P53671 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.32□□□□□ -1.4
LIMK2P53671 GAPDHP59-201ENST00000435908 267 ntBASIC6.32□□□□□ -1.4
LIMK2P53671 H3F3BP1-201ENST00000440551 403 ntBASIC6.32□□□□□ -1.4
LIMK2P53671 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.32□□□□□ -1.4
LIMK2P53671 POU5F1P5-201ENST00000445059 658 ntBASIC6.32□□□□□ -1.4
LIMK2P53671 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.32□□□□□ -1.4
LIMK2P53671 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.32□□□□□ -1.4
LIMK2P53671 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.32□□□□□ -1.4
LIMK2P53671 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.32□□□□□ -1.4
LIMK2P53671 HSD3BP3-201ENST00000514706 994 ntBASIC6.32□□□□□ -1.4
LIMK2P53671 RNA5SP441-201ENST00000516809 88 ntBASIC6.32□□□□□ -1.4
LIMK2P53671 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.32□□□□□ -1.4
LIMK2P53671 AL133399.1-201ENST00000527476 298 ntBASIC6.32□□□□□ -1.4
LIMK2P53671 AC005363.1-201ENST00000530779 351 ntBASIC6.32□□□□□ -1.4
LIMK2P53671 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.32□□□□□ -1.4
LIMK2P53671 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
LIMK2P53671 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms