Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
NEK3P51956 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
NEK3P51956 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NEK3P51956 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NEK3P51956 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NEK3P51956 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
NEK3P51956 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
NEK3P51956 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NEK3P51956 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
NEK3P51956 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NEK3P51956 RNA5SP65-201ENST00000363166 119 ntBASIC6.83□□□□□ -1.32
NEK3P51956 AL451142.1-201ENST00000375867 775 ntBASIC6.83□□□□□ -1.32
NEK3P51956 SNORA7A-201ENST00000384765 139 ntBASIC6.83□□□□□ -1.32
NEK3P51956 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.83□□□□□ -1.32
NEK3P51956 RNA5SP155-201ENST00000411154 129 ntBASIC6.83□□□□□ -1.32
NEK3P51956 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.83□□□□□ -1.32
NEK3P51956 AC073464.3-201ENST00000422564 712 ntBASIC6.83□□□□□ -1.32
NEK3P51956 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
NEK3P51956 AL596268.1-201ENST00000427910 1048 ntBASIC6.83□□□□□ -1.32
NEK3P51956 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.83□□□□□ -1.32
NEK3P51956 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.83□□□□□ -1.32
NEK3P51956 RPL23AP28-201ENST00000448062 470 ntBASIC6.83□□□□□ -1.32
NEK3P51956 KF459542.1-201ENST00000450908 553 ntBASIC6.83□□□□□ -1.32
NEK3P51956 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.83□□□□□ -1.32
NEK3P51956 SULT1D1P-201ENST00000458020 882 ntBASIC6.83□□□□□ -1.32
NEK3P51956 RN7SL393P-201ENST00000463588 296 ntBASIC6.83□□□□□ -1.32
NEK3P51956 RPSAP39-201ENST00000467439 883 ntBASIC6.83□□□□□ -1.32
NEK3P51956 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.83□□□□□ -1.32
NEK3P51956 AC098583.1-201ENST00000480875 255 ntBASIC6.83□□□□□ -1.32
NEK3P51956 OR11I1P-201ENST00000486033 954 ntBASIC6.83□□□□□ -1.32
NEK3P51956 SSR3-208ENST00000496050 579 ntTSL 4 BASIC6.83□□□□□ -1.32
NEK3P51956 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.83□□□□□ -1.32
NEK3P51956 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.83□□□□□ -1.32
NEK3P51956 NACAP5-201ENST00000509863 636 ntBASIC6.83□□□□□ -1.32
NEK3P51956 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.83□□□□□ -1.32
NEK3P51956 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.83□□□□□ -1.32
NEK3P51956 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.83□□□□□ -1.32
NEK3P51956 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.83□□□□□ -1.32
NEK3P51956 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.83□□□□□ -1.32
NEK3P51956 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.83□□□□□ -1.32
NEK3P51956 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.83□□□□□ -1.32
NEK3P51956 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.83□□□□□ -1.32
NEK3P51956 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.83□□□□□ -1.32
NEK3P51956 AL390877.1-201ENST00000605704 214 ntBASIC6.83□□□□□ -1.32
NEK3P51956 MIR6503-201ENST00000622884 86 ntBASIC6.83□□□□□ -1.32
NEK3P51956 AC079298.2-201ENST00000623885 459 ntBASIC6.83□□□□□ -1.32
NEK3P51956 AC007603.3-201ENST00000636915 979 ntBASIC6.83□□□□□ -1.32
NEK3P51956 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
NEK3P51956 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
NEK3P51956 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NEK3P51956 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NEK3P51956 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NEK3P51956 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
NEK3P51956 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NEK3P51956 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.83□□□□□ -1.32
NEK3P51956 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.83□□□□□ -1.32
NEK3P51956 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
NEK3P51956 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.83□□□□□ -1.32
NEK3P51956 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NEK3P51956 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NEK3P51956 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NEK3P51956 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NEK3P51956 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.82□□□□□ -1.32
NEK3P51956 AC010132.4-201ENST00000569883 1368 ntBASIC6.82□□□□□ -1.32
NEK3P51956 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.82□□□□□ -1.32
NEK3P51956 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.82□□□□□ -1.32
NEK3P51956 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NEK3P51956 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
NEK3P51956 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
NEK3P51956 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
NEK3P51956 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
NEK3P51956 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NEK3P51956 SNORD115-48-201ENST00000364764 76 ntBASIC6.82□□□□□ -1.32
NEK3P51956 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.82□□□□□ -1.32
NEK3P51956 RNA5SP105-201ENST00000391123 113 ntBASIC6.82□□□□□ -1.32
NEK3P51956 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
NEK3P51956 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.82□□□□□ -1.32
NEK3P51956 BTF3P9-201ENST00000418784 283 ntBASIC6.82□□□□□ -1.32
NEK3P51956 FAM183DP-201ENST00000421987 399 ntBASIC6.82□□□□□ -1.32
NEK3P51956 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NEK3P51956 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.82□□□□□ -1.32
NEK3P51956 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.82□□□□□ -1.32
NEK3P51956 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.82□□□□□ -1.32
NEK3P51956 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NEK3P51956 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.82□□□□□ -1.32
NEK3P51956 NPM1P23-201ENST00000440193 849 ntBASIC6.82□□□□□ -1.32
NEK3P51956 RPL12P49-201ENST00000441100 121 ntBASIC6.82□□□□□ -1.32
NEK3P51956 AL031681.1-201ENST00000443304 400 ntBASIC6.82□□□□□ -1.32
NEK3P51956 PFN1P11-201ENST00000445829 389 ntBASIC6.82□□□□□ -1.32
NEK3P51956 H3F3AP3-201ENST00000497682 407 ntBASIC6.82□□□□□ -1.32
NEK3P51956 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.82□□□□□ -1.32
NEK3P51956 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.82□□□□□ -1.32
NEK3P51956 PSMA2P2-201ENST00000504319 686 ntBASIC6.82□□□□□ -1.32
NEK3P51956 SNORA58-201ENST00000505219 137 ntBASIC6.82□□□□□ -1.32
NEK3P51956 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.82□□□□□ -1.32
NEK3P51956 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.82□□□□□ -1.32
NEK3P51956 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.82□□□□□ -1.32
NEK3P51956 KCTD9P4-201ENST00000526766 1166 ntBASIC6.82□□□□□ -1.32
NEK3P51956 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.82□□□□□ -1.32
NEK3P51956 AC007068.2-201ENST00000543168 395 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms