Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 GOT2P2-201ENST00000450663 1251 ntBASIC7.88□□□□□ -1.15
USP11P51784 C1DP3-201ENST00000455013 423 ntBASIC7.88□□□□□ -1.15
USP11P51784 RARRES2P3-201ENST00000457739 473 ntBASIC7.88□□□□□ -1.15
USP11P51784 TPT1P1-201ENST00000458495 518 ntBASIC7.88□□□□□ -1.15
USP11P51784 RPS26P11-201ENST00000463445 348 ntBASIC7.88□□□□□ -1.15
USP11P51784 RPS26P6-201ENST00000475156 348 ntBASIC7.88□□□□□ -1.15
USP11P51784 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC7.88□□□□□ -1.15
USP11P51784 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC7.88□□□□□ -1.15
USP11P51784 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.88□□□□□ -1.15
USP11P51784 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC7.88□□□□□ -1.15
USP11P51784 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC7.88□□□□□ -1.15
USP11P51784 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC7.88□□□□□ -1.15
USP11P51784 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.88□□□□□ -1.15
USP11P51784 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC7.88□□□□□ -1.15
USP11P51784 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC7.88□□□□□ -1.15
USP11P51784 NXPE2P1-201ENST00000543705 726 ntBASIC7.88□□□□□ -1.15
USP11P51784 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC7.88□□□□□ -1.15
USP11P51784 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC7.88□□□□□ -1.15
USP11P51784 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC7.88□□□□□ -1.15
USP11P51784 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC7.88□□□□□ -1.15
USP11P51784 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7.88□□□□□ -1.15
USP11P51784 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC7.88□□□□□ -1.15
USP11P51784 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
USP11P51784 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC7.88□□□□□ -1.15
USP11P51784 CCDC58P3-201ENST00000590792 430 ntBASIC7.88□□□□□ -1.15
USP11P51784 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC7.88□□□□□ -1.15
USP11P51784 AC067959.1-201ENST00000604334 379 ntBASIC7.88□□□□□ -1.15
USP11P51784 AL360219.1-201ENST00000610230 366 ntBASIC7.88□□□□□ -1.15
USP11P51784 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.88□□□□□ -1.15
USP11P51784 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.88□□□□□ -1.15
USP11P51784 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC7.88□□□□□ -1.15
USP11P51784 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
USP11P51784 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.88□□□□□ -1.15
USP11P51784 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
USP11P51784 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.88□□□□□ -1.15
USP11P51784 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USP11P51784 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
USP11P51784 ALB-220ENST00000621628 1606 ntTSL 5 BASIC7.88□□□□□ -1.15
USP11P51784 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
USP11P51784 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USP11P51784 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USP11P51784 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USP11P51784 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.88□□□□□ -1.15
USP11P51784 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USP11P51784 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
USP11P51784 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
USP11P51784 SLC2A3P4-201ENST00000521259 1471 ntBASIC7.87□□□□□ -1.15
USP11P51784 NCOA4P3-201ENST00000513203 1877 ntBASIC7.87□□□□□ -1.15
USP11P51784 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.87□□□□□ -1.15
USP11P51784 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
USP11P51784 AC099786.3-201ENST00000565735 1410 ntBASIC7.87□□□□□ -1.15
USP11P51784 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.87□□□□□ -1.15
USP11P51784 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
USP11P51784 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
USP11P51784 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
USP11P51784 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
USP11P51784 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
USP11P51784 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.87□□□□□ -1.15
USP11P51784 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
USP11P51784 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
USP11P51784 OR10D1P-201ENST00000355343 936 ntBASIC7.87□□□□□ -1.15
USP11P51784 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
USP11P51784 RNA5SP176-201ENST00000390956 110 ntBASIC7.87□□□□□ -1.15
USP11P51784 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
USP11P51784 AMZ2P2-201ENST00000406819 1057 ntBASIC7.87□□□□□ -1.15
USP11P51784 SETP22-201ENST00000412243 957 ntBASIC7.87□□□□□ -1.15
USP11P51784 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.87□□□□□ -1.15
USP11P51784 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.87□□□□□ -1.15
USP11P51784 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
USP11P51784 ZNF965P-201ENST00000432501 817 ntBASIC7.87□□□□□ -1.15
USP11P51784 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.87□□□□□ -1.15
USP11P51784 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC7.87□□□□□ -1.15
USP11P51784 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC7.87□□□□□ -1.15
USP11P51784 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.87□□□□□ -1.15
USP11P51784 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC7.87□□□□□ -1.15
USP11P51784 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.87□□□□□ -1.15
USP11P51784 NMNAT1P3-201ENST00000457517 888 ntBASIC7.87□□□□□ -1.15
USP11P51784 RN7SL492P-201ENST00000460700 295 ntBASIC7.87□□□□□ -1.15
USP11P51784 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
USP11P51784 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC7.87□□□□□ -1.15
USP11P51784 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
USP11P51784 AC026826.1-201ENST00000493002 361 ntBASIC7.87□□□□□ -1.15
USP11P51784 OR10J9P-201ENST00000511932 987 ntBASIC7.87□□□□□ -1.15
USP11P51784 RNA5SP278-201ENST00000517055 102 ntBASIC7.87□□□□□ -1.15
USP11P51784 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC7.87□□□□□ -1.15
USP11P51784 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC7.87□□□□□ -1.15
USP11P51784 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC7.87□□□□□ -1.15
USP11P51784 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC7.87□□□□□ -1.15
USP11P51784 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7.87□□□□□ -1.15
USP11P51784 FXNP1-201ENST00000555153 337 ntBASIC7.87□□□□□ -1.15
USP11P51784 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC7.87□□□□□ -1.15
USP11P51784 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC7.87□□□□□ -1.15
USP11P51784 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC7.87□□□□□ -1.15
USP11P51784 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.87□□□□□ -1.15
USP11P51784 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC7.87□□□□□ -1.15
USP11P51784 AC092106.3-201ENST00000611308 722 ntBASIC7.87□□□□□ -1.15
USP11P51784 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC7.87□□□□□ -1.15
USP11P51784 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC7.87□□□□□ -1.15
USP11P51784 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
USP11P51784 OGFOD1P1-201ENST00000447552 1592 ntBASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms