Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
MRE11P49959 AC004232.2-201ENST00000574245 821 ntBASIC7.67□□□□□ -1.18
MRE11P49959 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
MRE11P49959 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC7.67□□□□□ -1.18
MRE11P49959 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
MRE11P49959 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.67□□□□□ -1.18
MRE11P49959 AL360012.1-201ENST00000602813 131 ntBASIC7.67□□□□□ -1.18
MRE11P49959 AC242628.1-201ENST00000606810 391 ntBASIC7.67□□□□□ -1.18
MRE11P49959 AC104307.1-201ENST00000616142 196 ntBASIC7.67□□□□□ -1.18
MRE11P49959 AC243830.2-201ENST00000618067 630 ntBASIC7.67□□□□□ -1.18
MRE11P49959 MIR6849-201ENST00000618543 69 ntBASIC7.67□□□□□ -1.18
MRE11P49959 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.67□□□□□ -1.18
MRE11P49959 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.67□□□□□ -1.18
MRE11P49959 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
MRE11P49959 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC7.67□□□□□ -1.18
MRE11P49959 AL139254.3-201ENST00000641097 674 ntBASIC7.67□□□□□ -1.18
MRE11P49959 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC7.67□□□□□ -1.18
MRE11P49959 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
MRE11P49959 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
MRE11P49959 DCN-218ENST00000551354 2924 ntTSL 3 BASIC7.67□□□□□ -1.18
MRE11P49959 WDR95P-201ENST00000425638 1542 ntBASIC7.67□□□□□ -1.18
MRE11P49959 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
MRE11P49959 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
MRE11P49959 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
MRE11P49959 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC7.66□□□□□ -1.18
MRE11P49959 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
MRE11P49959 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
MRE11P49959 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
MRE11P49959 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
MRE11P49959 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
MRE11P49959 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.66□□□□□ -1.18
MRE11P49959 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
MRE11P49959 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
MRE11P49959 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
MRE11P49959 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
MRE11P49959 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
MRE11P49959 RNU1-38P-201ENST00000362817 144 ntBASIC7.66□□□□□ -1.18
MRE11P49959 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
MRE11P49959 RN7SKP161-201ENST00000411110 305 ntBASIC7.66□□□□□ -1.18
MRE11P49959 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.66□□□□□ -1.18
MRE11P49959 HMGA1P8-201ENST00000414130 321 ntBASIC7.66□□□□□ -1.18
MRE11P49959 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC7.66□□□□□ -1.18
MRE11P49959 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.66□□□□□ -1.18
MRE11P49959 MTCO3P43-201ENST00000440974 771 ntBASIC7.66□□□□□ -1.18
MRE11P49959 AC007383.1-201ENST00000445875 636 ntBASIC7.66□□□□□ -1.18
MRE11P49959 AC009963.4-201ENST00000448535 339 ntBASIC7.66□□□□□ -1.18
MRE11P49959 RPS7P10-201ENST00000464254 603 ntBASIC7.66□□□□□ -1.18
MRE11P49959 AC074386.1-201ENST00000476560 767 ntBASIC7.66□□□□□ -1.18
MRE11P49959 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC7.66□□□□□ -1.18
MRE11P49959 RPL5P33-201ENST00000487833 905 ntBASIC7.66□□□□□ -1.18
MRE11P49959 OR51A1P-201ENST00000511110 946 ntBASIC7.66□□□□□ -1.18
MRE11P49959 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.66□□□□□ -1.18
MRE11P49959 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC7.66□□□□□ -1.18
MRE11P49959 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC7.66□□□□□ -1.18
MRE11P49959 RPS7P1-201ENST00000571702 585 ntBASIC7.66□□□□□ -1.18
MRE11P49959 PRR13P5-201ENST00000596581 442 ntBASIC7.66□□□□□ -1.18
MRE11P49959 AL390058.1-201ENST00000603834 629 ntBASIC7.66□□□□□ -1.18
MRE11P49959 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC7.66□□□□□ -1.18
MRE11P49959 AL049541.2-201ENST00000626377 555 ntBASIC7.66□□□□□ -1.18
MRE11P49959 MIR4302-201ENST00000638058 60 ntBASIC7.66□□□□□ -1.18
MRE11P49959 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.66□□□□□ -1.18
MRE11P49959 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.66□□□□□ -1.18
MRE11P49959 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
MRE11P49959 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
MRE11P49959 AL592429.1-201ENST00000403909 1473 ntBASIC7.66□□□□□ -1.18
MRE11P49959 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
MRE11P49959 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
MRE11P49959 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC7.66□□□□□ -1.18
MRE11P49959 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
MRE11P49959 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
MRE11P49959 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC7.66□□□□□ -1.18
MRE11P49959 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC7.66□□□□□ -1.18
MRE11P49959 Z97989.1-201ENST00000531702 2421 ntBASIC7.66□□□□□ -1.18
MRE11P49959 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
MRE11P49959 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
MRE11P49959 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
MRE11P49959 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
MRE11P49959 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
MRE11P49959 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
MRE11P49959 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
MRE11P49959 SNORA38B-201ENST00000363524 131 ntBASIC7.65□□□□□ -1.18
MRE11P49959 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
MRE11P49959 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
MRE11P49959 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC7.65□□□□□ -1.18
MRE11P49959 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
MRE11P49959 AL390840.1-201ENST00000420303 988 ntBASIC7.65□□□□□ -1.18
MRE11P49959 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC7.65□□□□□ -1.18
MRE11P49959 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC7.65□□□□□ -1.18
MRE11P49959 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
MRE11P49959 WASF5P-205ENST00000428639 1455 ntBASIC7.65□□□□□ -1.18
MRE11P49959 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.65□□□□□ -1.18
MRE11P49959 GAPDHP19-201ENST00000431768 1005 ntBASIC7.65□□□□□ -1.18
MRE11P49959 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
MRE11P49959 RPL17P35-201ENST00000432217 549 ntBASIC7.65□□□□□ -1.18
MRE11P49959 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC7.65□□□□□ -1.18
MRE11P49959 XKRYP6-201ENST00000440468 1116 ntBASIC7.65□□□□□ -1.18
MRE11P49959 MTND1P26-201ENST00000440488 538 ntBASIC7.65□□□□□ -1.18
MRE11P49959 AL158053.1-201ENST00000441503 453 ntBASIC7.65□□□□□ -1.18
MRE11P49959 XKRYP3-201ENST00000442113 1116 ntBASIC7.65□□□□□ -1.18
MRE11P49959 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms