Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.49□□□□□ -1.53
CX3CR1P49238 AC005332.4-201ENST00000592752 579 ntBASIC5.49□□□□□ -1.53
CX3CR1P49238 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.49□□□□□ -1.53
CX3CR1P49238 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.49□□□□□ -1.53
CX3CR1P49238 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.49□□□□□ -1.53
CX3CR1P49238 MIR6883-201ENST00000614952 78 ntBASIC5.49□□□□□ -1.53
CX3CR1P49238 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.49□□□□□ -1.53
CX3CR1P49238 AC005899.7-201ENST00000618199 588 ntBASIC5.49□□□□□ -1.53
CX3CR1P49238 AL157762.1-201ENST00000619612 415 ntBASIC5.49□□□□□ -1.53
CX3CR1P49238 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.49□□□□□ -1.53
CX3CR1P49238 AL353684.1-201ENST00000622677 1120 ntBASIC5.49□□□□□ -1.53
CX3CR1P49238 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CR1P49238 AC092724.1-201ENST00000624623 3397 ntBASIC5.49□□□□□ -1.53
CX3CR1P49238 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CR1P49238 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.49□□□□□ -1.53
CX3CR1P49238 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.49□□□□□ -1.53
CX3CR1P49238 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
CX3CR1P49238 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CR1P49238 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CR1P49238 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CR1P49238 AP001541.1-201ENST00000623322 1904 ntBASIC5.48□□□□□ -1.53
CX3CR1P49238 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.48□□□□□ -1.53
CX3CR1P49238 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.48□□□□□ -1.53
CX3CR1P49238 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.48□□□□□ -1.53
CX3CR1P49238 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CR1P49238 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CR1P49238 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CX3CR1P49238 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CR1P49238 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.48□□□□□ -1.53
CX3CR1P49238 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CR1P49238 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.48□□□□□ -1.53
CX3CR1P49238 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CR1P49238 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CX3CR1P49238 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CX3CR1P49238 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.48□□□□□ -1.53
CX3CR1P49238 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CR1P49238 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CR1P49238 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CR1P49238 RNU11-201ENST00000387069 134 ntBASIC5.48□□□□□ -1.53
CX3CR1P49238 UBTFL2-201ENST00000411859 1191 ntBASIC5.48□□□□□ -1.53
CX3CR1P49238 AC007562.1-201ENST00000421819 517 ntBASIC5.48□□□□□ -1.53
CX3CR1P49238 GPN3P1-201ENST00000423883 535 ntBASIC5.48□□□□□ -1.53
CX3CR1P49238 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.48□□□□□ -1.53
CX3CR1P49238 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.48□□□□□ -1.53
CX3CR1P49238 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.48□□□□□ -1.53
CX3CR1P49238 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.48□□□□□ -1.53
CX3CR1P49238 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.48□□□□□ -1.53
CX3CR1P49238 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.48□□□□□ -1.53
CX3CR1P49238 AC023274.2-201ENST00000445264 521 ntBASIC5.48□□□□□ -1.53
CX3CR1P49238 RPL7L1P3-201ENST00000455249 689 ntBASIC5.48□□□□□ -1.53
CX3CR1P49238 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CR1P49238 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.48□□□□□ -1.53
CX3CR1P49238 AL355032.1-201ENST00000472981 438 ntBASIC5.48□□□□□ -1.53
CX3CR1P49238 RN7SL369P-201ENST00000477138 299 ntBASIC5.48□□□□□ -1.53
CX3CR1P49238 RPS7P11-201ENST00000484240 586 ntBASIC5.48□□□□□ -1.53
CX3CR1P49238 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.48□□□□□ -1.53
CX3CR1P49238 AC018639.1-201ENST00000492994 442 ntBASIC5.48□□□□□ -1.53
CX3CR1P49238 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.48□□□□□ -1.53
CX3CR1P49238 IGHV4-55-201ENST00000520889 368 ntBASIC5.48□□□□□ -1.53
CX3CR1P49238 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CR1P49238 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.48□□□□□ -1.53
CX3CR1P49238 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.48□□□□□ -1.53
CX3CR1P49238 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.48□□□□□ -1.53
CX3CR1P49238 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.48□□□□□ -1.53
CX3CR1P49238 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.48□□□□□ -1.53
CX3CR1P49238 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.48□□□□□ -1.53
CX3CR1P49238 AC024267.2-201ENST00000582737 417 ntBASIC5.48□□□□□ -1.53
CX3CR1P49238 AC027229.1-201ENST00000583887 253 ntBASIC5.48□□□□□ -1.53
CX3CR1P49238 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.48□□□□□ -1.53
CX3CR1P49238 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
CX3CR1P49238 AL360012.1-201ENST00000602813 131 ntBASIC5.48□□□□□ -1.53
CX3CR1P49238 AC139792.1-201ENST00000607051 647 ntBASIC5.48□□□□□ -1.53
CX3CR1P49238 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.48□□□□□ -1.53
CX3CR1P49238 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.48□□□□□ -1.53
CX3CR1P49238 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.48□□□□□ -1.53
CX3CR1P49238 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.48□□□□□ -1.53
CX3CR1P49238 AC003992.1-201ENST00000635364 557 ntBASIC5.48□□□□□ -1.53
CX3CR1P49238 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.48□□□□□ -1.53
CX3CR1P49238 AC132825.8-201ENST00000640783 297 ntBASIC5.48□□□□□ -1.53
CX3CR1P49238 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CR1P49238 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CR1P49238 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CR1P49238 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CR1P49238 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.48□□□□□ -1.53
CX3CR1P49238 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.48□□□□□ -1.53
CX3CR1P49238 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
CX3CR1P49238 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.48□□□□□ -1.53
CX3CR1P49238 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CR1P49238 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.48□□□□□ -1.53
CX3CR1P49238 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.48□□□□□ -1.53
CX3CR1P49238 CCNT2P1-201ENST00000423082 1315 ntBASIC5.48□□□□□ -1.53
CX3CR1P49238 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.47□□□□□ -1.53
CX3CR1P49238 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.47□□□□□ -1.53
CX3CR1P49238 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CR1P49238 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
CX3CR1P49238 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CR1P49238 AC096921.2-201ENST00000561507 1916 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.47□□□□□ -1.53
CX3CR1P49238 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.47□□□□□ -1.53
CX3CR1P49238 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms