Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.52□□□□□ -1.37
HADHAP40939 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.52□□□□□ -1.37
HADHAP40939 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.52□□□□□ -1.37
HADHAP40939 MIR4433B-201ENST00000581329 102 ntBASIC6.52□□□□□ -1.37
HADHAP40939 AC233702.7-202ENST00000582941 211 ntBASIC6.52□□□□□ -1.37
HADHAP40939 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.52□□□□□ -1.37
HADHAP40939 AC024589.2-201ENST00000605642 1294 ntBASIC6.52□□□□□ -1.37
HADHAP40939 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.52□□□□□ -1.37
HADHAP40939 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HADHAP40939 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.52□□□□□ -1.37
HADHAP40939 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HADHAP40939 ZNF101P1-201ENST00000435701 1720 ntBASIC6.52□□□□□ -1.37
HADHAP40939 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HADHAP40939 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HADHAP40939 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HADHAP40939 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HADHAP40939 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HADHAP40939 AC067942.1-201ENST00000488045 1493 ntBASIC6.52□□□□□ -1.37
HADHAP40939 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.52□□□□□ -1.37
HADHAP40939 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HADHAP40939 AC105749.1-201ENST00000631338 2008 ntBASIC6.52□□□□□ -1.37
HADHAP40939 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.52□□□□□ -1.37
HADHAP40939 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.52□□□□□ -1.37
HADHAP40939 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HADHAP40939 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HADHAP40939 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
HADHAP40939 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HADHAP40939 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
HADHAP40939 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.51□□□□□ -1.37
HADHAP40939 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.51□□□□□ -1.37
HADHAP40939 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HADHAP40939 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HADHAP40939 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.51□□□□□ -1.37
HADHAP40939 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.51□□□□□ -1.37
HADHAP40939 SNORA7A-201ENST00000384765 139 ntBASIC6.51□□□□□ -1.37
HADHAP40939 RN7SKP38-201ENST00000410782 309 ntBASIC6.51□□□□□ -1.37
HADHAP40939 AC116036.1-201ENST00000412199 367 ntBASIC6.51□□□□□ -1.37
HADHAP40939 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.51□□□□□ -1.37
HADHAP40939 GAPDHP19-201ENST00000431768 1005 ntBASIC6.51□□□□□ -1.37
HADHAP40939 CLNS1AP1-201ENST00000435954 682 ntBASIC6.51□□□□□ -1.37
HADHAP40939 AC092106.2-201ENST00000436597 487 ntBASIC6.51□□□□□ -1.37
HADHAP40939 COL11A2P1-205ENST00000441798 676 ntBASIC6.51□□□□□ -1.37
HADHAP40939 OR13K1P-201ENST00000444577 975 ntBASIC6.51□□□□□ -1.37
HADHAP40939 HMGN1P8-201ENST00000463578 288 ntBASIC6.51□□□□□ -1.37
HADHAP40939 RN7SL165P-201ENST00000477476 291 ntBASIC6.51□□□□□ -1.37
HADHAP40939 RPL5P14-201ENST00000494197 878 ntBASIC6.51□□□□□ -1.37
HADHAP40939 NPM1P27-201ENST00000502784 830 ntBASIC6.51□□□□□ -1.37
HADHAP40939 AC093870.1-201ENST00000506837 213 ntBASIC6.51□□□□□ -1.37
HADHAP40939 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HADHAP40939 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.51□□□□□ -1.37
HADHAP40939 SUMO2P19-201ENST00000518920 295 ntBASIC6.51□□□□□ -1.37
HADHAP40939 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.51□□□□□ -1.37
HADHAP40939 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
HADHAP40939 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
HADHAP40939 BTG1P1-201ENST00000540396 508 ntBASIC6.51□□□□□ -1.37
HADHAP40939 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.51□□□□□ -1.37
HADHAP40939 AC090115.2-201ENST00000548060 883 ntBASIC6.51□□□□□ -1.37
HADHAP40939 AC026956.1-201ENST00000558741 396 ntBASIC6.51□□□□□ -1.37
HADHAP40939 SYPL1P2-201ENST00000582878 727 ntBASIC6.51□□□□□ -1.37
HADHAP40939 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.51□□□□□ -1.37
HADHAP40939 VN1R81P-201ENST00000602085 372 ntBASIC6.51□□□□□ -1.37
HADHAP40939 AC092944.2-201ENST00000605443 889 ntBASIC6.51□□□□□ -1.37
HADHAP40939 AC138473.1-201ENST00000605717 526 ntBASIC6.51□□□□□ -1.37
HADHAP40939 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.51□□□□□ -1.37
HADHAP40939 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.51□□□□□ -1.37
HADHAP40939 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
HADHAP40939 AC027279.1-201ENST00000568885 4284 ntBASIC6.51□□□□□ -1.37
HADHAP40939 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.51□□□□□ -1.37
HADHAP40939 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HADHAP40939 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
HADHAP40939 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HADHAP40939 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.5□□□□□ -1.37
HADHAP40939 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
HADHAP40939 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.5□□□□□ -1.37
HADHAP40939 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.5□□□□□ -1.37
HADHAP40939 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HADHAP40939 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.5□□□□□ -1.37
HADHAP40939 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.5□□□□□ -1.37
HADHAP40939 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HADHAP40939 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
HADHAP40939 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
HADHAP40939 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HADHAP40939 CUL4AP1-201ENST00000514750 1863 ntBASIC6.5□□□□□ -1.37
HADHAP40939 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HADHAP40939 AC011369.2-201ENST00000624423 1567 ntBASIC6.5□□□□□ -1.37
HADHAP40939 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
HADHAP40939 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HADHAP40939 OR7E25P-201ENST00000344844 931 ntBASIC6.5□□□□□ -1.37
HADHAP40939 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HADHAP40939 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
HADHAP40939 LCN1P2-201ENST00000372030 223 ntBASIC6.5□□□□□ -1.37
HADHAP40939 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HADHAP40939 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.5□□□□□ -1.37
HADHAP40939 CBX1P3-201ENST00000413296 527 ntBASIC6.5□□□□□ -1.37
HADHAP40939 HMGA1P8-201ENST00000414130 321 ntBASIC6.5□□□□□ -1.37
HADHAP40939 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HADHAP40939 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.5□□□□□ -1.37
HADHAP40939 AL139184.1-202ENST00000422303 222 ntBASIC6.5□□□□□ -1.37
HADHAP40939 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.5□□□□□ -1.37
HADHAP40939 AL645939.3-201ENST00000435408 225 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms