Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.63□□□□□ -1.19
TM4SF1P30408 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.63□□□□□ -1.19
TM4SF1P30408 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TM4SF1P30408 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
TM4SF1P30408 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TM4SF1P30408 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.63□□□□□ -1.19
TM4SF1P30408 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.63□□□□□ -1.19
TM4SF1P30408 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
TM4SF1P30408 RNA5SP46-201ENST00000362370 120 ntBASIC7.63□□□□□ -1.19
TM4SF1P30408 RNU105B-201ENST00000364478 208 ntBASIC7.63□□□□□ -1.19
TM4SF1P30408 AL391422.1-201ENST00000402155 436 ntBASIC7.63□□□□□ -1.19
TM4SF1P30408 SPTLC1P2-201ENST00000407089 121 ntBASIC7.63□□□□□ -1.19
TM4SF1P30408 NANOGP4-201ENST00000427230 913 ntBASIC7.63□□□□□ -1.19
TM4SF1P30408 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC7.63□□□□□ -1.19
TM4SF1P30408 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC7.63□□□□□ -1.19
TM4SF1P30408 AC023245.1-201ENST00000468501 517 ntBASIC7.63□□□□□ -1.19
TM4SF1P30408 RPL32P9-201ENST00000487963 407 ntBASIC7.63□□□□□ -1.19
TM4SF1P30408 AC138866.2-201ENST00000508650 584 ntBASIC7.63□□□□□ -1.19
TM4SF1P30408 IGLV2-28-201ENST00000520681 304 ntBASIC7.63□□□□□ -1.19
TM4SF1P30408 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC7.63□□□□□ -1.19
TM4SF1P30408 AC110056.1-201ENST00000525759 911 ntBASIC7.63□□□□□ -1.19
TM4SF1P30408 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC7.63□□□□□ -1.19
TM4SF1P30408 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.63□□□□□ -1.19
TM4SF1P30408 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.63□□□□□ -1.19
TM4SF1P30408 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.63□□□□□ -1.19
TM4SF1P30408 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.63□□□□□ -1.19
TM4SF1P30408 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.63□□□□□ -1.19
TM4SF1P30408 AL139041.1-201ENST00000605480 610 ntBASIC7.63□□□□□ -1.19
TM4SF1P30408 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC7.63□□□□□ -1.19
TM4SF1P30408 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
TM4SF1P30408 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
TM4SF1P30408 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TM4SF1P30408 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TM4SF1P30408 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.63□□□□□ -1.19
TM4SF1P30408 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
TM4SF1P30408 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
TM4SF1P30408 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.63□□□□□ -1.19
TM4SF1P30408 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
TM4SF1P30408 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
TM4SF1P30408 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
TM4SF1P30408 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.63□□□□□ -1.19
TM4SF1P30408 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
TM4SF1P30408 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.63□□□□□ -1.19
TM4SF1P30408 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
TM4SF1P30408 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TM4SF1P30408 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TM4SF1P30408 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.62□□□□□ -1.19
TM4SF1P30408 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TM4SF1P30408 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TM4SF1P30408 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
TM4SF1P30408 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC7.62□□□□□ -1.19
TM4SF1P30408 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
TM4SF1P30408 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TM4SF1P30408 MAPK10-371ENST00000641952 5209 ntBASIC7.62□□□□□ -1.19
TM4SF1P30408 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.62□□□□□ -1.19
TM4SF1P30408 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
TM4SF1P30408 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.62□□□□□ -1.19
TM4SF1P30408 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
TM4SF1P30408 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
TM4SF1P30408 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
TM4SF1P30408 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
TM4SF1P30408 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
TM4SF1P30408 FIGN-202ENST00000409634 746 ntTSL 5 BASIC7.62□□□□□ -1.19
TM4SF1P30408 RPS15AP30-201ENST00000420976 390 ntBASIC7.62□□□□□ -1.19
TM4SF1P30408 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC7.62□□□□□ -1.19
TM4SF1P30408 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.62□□□□□ -1.19
TM4SF1P30408 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC7.62□□□□□ -1.19
TM4SF1P30408 AC127526.2-201ENST00000426436 775 ntBASIC7.62□□□□□ -1.19
TM4SF1P30408 FTH1P10-202ENST00000430907 550 ntBASIC7.62□□□□□ -1.19
TM4SF1P30408 AC108693.1-201ENST00000496068 432 ntBASIC7.62□□□□□ -1.19
TM4SF1P30408 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC7.62□□□□□ -1.19
TM4SF1P30408 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.62□□□□□ -1.19
TM4SF1P30408 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.62□□□□□ -1.19
TM4SF1P30408 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC7.62□□□□□ -1.19
TM4SF1P30408 MIR6798-201ENST00000612887 67 ntBASIC7.62□□□□□ -1.19
TM4SF1P30408 AL445647.2-201ENST00000615170 130 ntBASIC7.62□□□□□ -1.19
TM4SF1P30408 AL445649.1-201ENST00000615941 691 ntBASIC7.62□□□□□ -1.19
TM4SF1P30408 MIR8089-201ENST00000620165 82 ntBASIC7.62□□□□□ -1.19
TM4SF1P30408 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC7.62□□□□□ -1.19
TM4SF1P30408 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
TM4SF1P30408 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.62□□□□□ -1.19
TM4SF1P30408 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.62□□□□□ -1.19
TM4SF1P30408 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
TM4SF1P30408 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
TM4SF1P30408 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
TM4SF1P30408 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TM4SF1P30408 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
TM4SF1P30408 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
TM4SF1P30408 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TM4SF1P30408 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
TM4SF1P30408 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
TM4SF1P30408 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TM4SF1P30408 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
TM4SF1P30408 AC105235.1-201ENST00000623208 1816 ntBASIC7.62□□□□□ -1.19
TM4SF1P30408 AC024587.1-201ENST00000505925 2157 ntBASIC7.61□□□□□ -1.19
TM4SF1P30408 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TM4SF1P30408 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.61□□□□□ -1.19
TM4SF1P30408 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
TM4SF1P30408 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TM4SF1P30408 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms