Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
EPHA3P29320 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.28□□□□□ -1.4
EPHA3P29320 MTND1P8-201ENST00000571424 950 ntBASIC6.28□□□□□ -1.4
EPHA3P29320 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
EPHA3P29320 EXOSC3P2-201ENST00000594464 497 ntBASIC6.28□□□□□ -1.4
EPHA3P29320 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.28□□□□□ -1.4
EPHA3P29320 AL163051.2-201ENST00000618976 735 ntBASIC6.28□□□□□ -1.4
EPHA3P29320 AC018558.4-201ENST00000622153 281 ntBASIC6.28□□□□□ -1.4
EPHA3P29320 AP003499.2-201ENST00000624100 483 ntBASIC6.28□□□□□ -1.4
EPHA3P29320 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.28□□□□□ -1.4
EPHA3P29320 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
EPHA3P29320 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
EPHA3P29320 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
EPHA3P29320 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
EPHA3P29320 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
EPHA3P29320 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
EPHA3P29320 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
EPHA3P29320 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
EPHA3P29320 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.4
EPHA3P29320 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
EPHA3P29320 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
EPHA3P29320 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
EPHA3P29320 PSMC1P6-201ENST00000477233 1319 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 AL929601.4-201ENST00000613011 1341 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
EPHA3P29320 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.27□□□□□ -1.41
EPHA3P29320 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
EPHA3P29320 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.27□□□□□ -1.41
EPHA3P29320 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.27□□□□□ -1.41
EPHA3P29320 AL731532.1-201ENST00000623972 4236 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
EPHA3P29320 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
EPHA3P29320 MIR99A-201ENST00000384906 81 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.27□□□□□ -1.41
EPHA3P29320 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
EPHA3P29320 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.27□□□□□ -1.41
EPHA3P29320 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.27□□□□□ -1.41
EPHA3P29320 MRPS21P5-201ENST00000417885 231 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 VN1R37P-201ENST00000419096 748 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 CYP4F30P-202ENST00000420048 405 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.27□□□□□ -1.41
EPHA3P29320 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.27□□□□□ -1.41
EPHA3P29320 AC003989.1-201ENST00000434569 565 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.27□□□□□ -1.41
EPHA3P29320 BX679664.2-201ENST00000439282 283 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 SNRPBP1-201ENST00000443634 282 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.27□□□□□ -1.41
EPHA3P29320 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.27□□□□□ -1.41
EPHA3P29320 CBX5P1-201ENST00000468470 561 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 AC108729.2-201ENST00000476543 840 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 RN7SL776P-201ENST00000493390 268 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 AC093801.2-201ENST00000503966 1050 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 AC010468.3-201ENST00000508225 458 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.27□□□□□ -1.41
EPHA3P29320 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
EPHA3P29320 AL390198.2-201ENST00000510553 222 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.27□□□□□ -1.41
EPHA3P29320 IGKV2D-38-201ENST00000518423 240 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.27□□□□□ -1.41
EPHA3P29320 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.27□□□□□ -1.41
EPHA3P29320 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.27□□□□□ -1.41
EPHA3P29320 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.27□□□□□ -1.41
EPHA3P29320 OR4A40P-201ENST00000533878 948 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 SETP17-201ENST00000534163 817 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 AC007068.2-201ENST00000543168 395 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.27□□□□□ -1.41
EPHA3P29320 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.27□□□□□ -1.41
EPHA3P29320 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
EPHA3P29320 MIR4685-201ENST00000578185 69 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 WDR45BP1-201ENST00000583470 1029 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 MIR3159-201ENST00000584572 74 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 AC245884.10-201ENST00000597355 337 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.27□□□□□ -1.41
EPHA3P29320 AC135178.6-201ENST00000605314 398 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
EPHA3P29320 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.27□□□□□ -1.41
EPHA3P29320 AC090772.4-201ENST00000623599 362 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.27□□□□□ -1.41
EPHA3P29320 AC061999.1-201ENST00000624454 177 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 AC140479.4-205ENST00000636339 820 ntBASIC6.27□□□□□ -1.41
EPHA3P29320 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
EPHA3P29320 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
EPHA3P29320 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.27□□□□□ -1.41
EPHA3P29320 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
EPHA3P29320 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
EPHA3P29320 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
EPHA3P29320 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
EPHA3P29320 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
EPHA3P29320 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
EPHA3P29320 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.26□□□□□ -1.41
EPHA3P29320 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
EPHA3P29320 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.26□□□□□ -1.41
EPHA3P29320 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.26□□□□□ -1.41
EPHA3P29320 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
EPHA3P29320 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.26□□□□□ -1.41
EPHA3P29320 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.26□□□□□ -1.41
EPHA3P29320 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
EPHA3P29320 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
EPHA3P29320 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
EPHA3P29320 AC011455.2-201ENST00000599320 3336 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms