Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RXRBP28702 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
RXRBP28702 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
RXRBP28702 RN7SKP271-201ENST00000410528 320 ntBASIC8.65□□□□□ -1.02
RXRBP28702 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC8.65□□□□□ -1.02
RXRBP28702 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC8.65□□□□□ -1.02
RXRBP28702 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC8.65□□□□□ -1.02
RXRBP28702 AL663061.1-201ENST00000416625 580 ntBASIC8.65□□□□□ -1.02
RXRBP28702 RPL17P17-201ENST00000419491 557 ntBASIC8.65□□□□□ -1.02
RXRBP28702 AL035660.1-201ENST00000422041 222 ntBASIC8.65□□□□□ -1.02
RXRBP28702 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC8.65□□□□□ -1.02
RXRBP28702 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
RXRBP28702 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC8.65□□□□□ -1.02
RXRBP28702 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC8.65□□□□□ -1.02
RXRBP28702 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC8.65□□□□□ -1.02
RXRBP28702 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC8.65□□□□□ -1.02
RXRBP28702 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC8.65□□□□□ -1.02
RXRBP28702 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC8.65□□□□□ -1.02
RXRBP28702 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC8.65□□□□□ -1.02
RXRBP28702 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC8.65□□□□□ -1.02
RXRBP28702 AP003115.1-201ENST00000569849 463 ntBASIC8.65□□□□□ -1.02
RXRBP28702 AP001357.1-201ENST00000586304 1053 ntBASIC8.65□□□□□ -1.02
RXRBP28702 AC090236.2-201ENST00000587933 1101 ntBASIC8.65□□□□□ -1.02
RXRBP28702 AC108673.3-201ENST00000609183 335 ntBASIC8.65□□□□□ -1.02
RXRBP28702 AC079395.3-201ENST00000615161 484 ntBASIC8.65□□□□□ -1.02
RXRBP28702 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC8.65□□□□□ -1.02
RXRBP28702 AC116631.1-202ENST00000640984 683 ntBASIC8.65□□□□□ -1.02
RXRBP28702 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
RXRBP28702 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
RXRBP28702 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC8.65□□□□□ -1.03
RXRBP28702 AP002833.3-201ENST00000625075 2265 ntBASIC8.65□□□□□ -1.03
RXRBP28702 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
RXRBP28702 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
RXRBP28702 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
RXRBP28702 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC8.65□□□□□ -1.03
RXRBP28702 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.03
RXRBP28702 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
RXRBP28702 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RXRBP28702 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RXRBP28702 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RXRBP28702 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC8.64□□□□□ -1.03
RXRBP28702 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC8.64□□□□□ -1.03
RXRBP28702 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RXRBP28702 CASC19-205ENST00000641013 1411 ntBASIC8.64□□□□□ -1.03
RXRBP28702 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC8.64□□□□□ -1.03
RXRBP28702 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RXRBP28702 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RXRBP28702 CA10-204ENST00000570565 2276 ntTSL 5 BASIC8.64□□□□□ -1.03
RXRBP28702 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
RXRBP28702 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RXRBP28702 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RXRBP28702 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RXRBP28702 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RXRBP28702 AC235565.1-201ENST00000456962 1325 ntBASIC8.64□□□□□ -1.03
RXRBP28702 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
RXRBP28702 RNFT1P3-201ENST00000340898 1052 ntBASIC8.64□□□□□ -1.03
RXRBP28702 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RXRBP28702 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
RXRBP28702 TAS2R15P-201ENST00000390674 928 ntBASIC8.64□□□□□ -1.03
RXRBP28702 AL133270.1-201ENST00000402635 279 ntBASIC8.64□□□□□ -1.03
RXRBP28702 LARP1P1-201ENST00000407692 292 ntBASIC8.64□□□□□ -1.03
RXRBP28702 MIR1203-201ENST00000408812 85 ntBASIC8.64□□□□□ -1.03
RXRBP28702 RN7SKP279-201ENST00000411383 298 ntBASIC8.64□□□□□ -1.03
RXRBP28702 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC8.64□□□□□ -1.03
RXRBP28702 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC8.64□□□□□ -1.03
RXRBP28702 GAPDHP51-201ENST00000426454 1000 ntBASIC8.64□□□□□ -1.03
RXRBP28702 AL590623.1-201ENST00000427864 105 ntBASIC8.64□□□□□ -1.03
RXRBP28702 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC8.64□□□□□ -1.03
RXRBP28702 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC8.64□□□□□ -1.03
RXRBP28702 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC8.64□□□□□ -1.03
RXRBP28702 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RXRBP28702 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC8.64□□□□□ -1.03
RXRBP28702 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC8.64□□□□□ -1.03
RXRBP28702 AC096743.1-201ENST00000485172 319 ntBASIC8.64□□□□□ -1.03
RXRBP28702 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC8.64□□□□□ -1.03
RXRBP28702 MTND4P2-201ENST00000507767 1203 ntBASIC8.64□□□□□ -1.03
RXRBP28702 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC8.64□□□□□ -1.03
RXRBP28702 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC8.64□□□□□ -1.03
RXRBP28702 KHDC1P1-201ENST00000511053 508 ntBASIC8.64□□□□□ -1.03
RXRBP28702 OR51A1P-201ENST00000511110 946 ntBASIC8.64□□□□□ -1.03
RXRBP28702 AC027338.1-201ENST00000514840 825 ntBASIC8.64□□□□□ -1.03
RXRBP28702 TBCA-209ENST00000522370 435 ntTSL 3 BASIC8.64□□□□□ -1.03
RXRBP28702 AC008429.2-201ENST00000523057 864 ntBASIC8.64□□□□□ -1.03
RXRBP28702 HAUS1P3-201ENST00000523909 662 ntBASIC8.64□□□□□ -1.03
RXRBP28702 AC025857.1-201ENST00000525252 377 ntBASIC8.64□□□□□ -1.03
RXRBP28702 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RXRBP28702 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC8.64□□□□□ -1.03
RXRBP28702 YWHAZP1-201ENST00000556286 722 ntBASIC8.64□□□□□ -1.03
RXRBP28702 AC091078.2-201ENST00000557145 559 ntBASIC8.64□□□□□ -1.03
RXRBP28702 AC074050.1-201ENST00000563247 211 ntBASIC8.64□□□□□ -1.03
RXRBP28702 AC027216.1-201ENST00000577726 685 ntBASIC8.64□□□□□ -1.03
RXRBP28702 RN7SL208P-201ENST00000577964 296 ntBASIC8.64□□□□□ -1.03
RXRBP28702 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC8.64□□□□□ -1.03
RXRBP28702 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC8.64□□□□□ -1.03
RXRBP28702 Z94722.1-201ENST00000604328 474 ntBASIC8.64□□□□□ -1.03
RXRBP28702 AC139795.3-201ENST00000606358 541 ntBASIC8.64□□□□□ -1.03
RXRBP28702 PCA3_2.1-201ENST00000612507 409 ntBASIC8.64□□□□□ -1.03
RXRBP28702 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC8.64□□□□□ -1.03
RXRBP28702 AL512652.1-201ENST00000619006 500 ntBASIC8.64□□□□□ -1.03
RXRBP28702 TMEM30CP-203ENST00000637814 1035 ntBASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms