Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
COL6A2P12110 MTCO1P43-201ENST00000431831 488 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 BX119904.1-201ENST00000432026 348 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.86□□□□□ -1.31
COL6A2P12110 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.86□□□□□ -1.31
COL6A2P12110 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 WBP1LP1-201ENST00000460451 896 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 AC010468.1-201ENST00000461022 817 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 RPL7P17-201ENST00000470927 724 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 AC079594.1-201ENST00000489757 331 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6.86□□□□□ -1.31
COL6A2P12110 AC147055.3-201ENST00000510547 851 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.86□□□□□ -1.31
COL6A2P12110 RNA5SP116-201ENST00000516132 98 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.86□□□□□ -1.31
COL6A2P12110 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL6A2P12110 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.86□□□□□ -1.31
COL6A2P12110 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.86□□□□□ -1.31
COL6A2P12110 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.86□□□□□ -1.31
COL6A2P12110 RN7SL199P-201ENST00000578752 281 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 RN7SL656P-201ENST00000579044 281 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 RN7SL404P-201ENST00000582421 281 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.86□□□□□ -1.31
COL6A2P12110 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC6.86□□□□□ -1.31
COL6A2P12110 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.86□□□□□ -1.31
COL6A2P12110 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.86□□□□□ -1.31
COL6A2P12110 AC007255.2-201ENST00000604053 631 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.86□□□□□ -1.31
COL6A2P12110 MIR6726-201ENST00000613751 61 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
COL6A2P12110 AC087072.2-201ENST00000621060 682 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.86□□□□□ -1.31
COL6A2P12110 FGL2-202ENST00000637771 989 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC6.86□□□□□ -1.31
COL6A2P12110 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL6A2P12110 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL6A2P12110 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL6A2P12110 AC007382.1-201ENST00000624376 2618 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL6A2P12110 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
COL6A2P12110 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL6A2P12110 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
COL6A2P12110 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL6A2P12110 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.85□□□□□ -1.31
COL6A2P12110 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.85□□□□□ -1.31
COL6A2P12110 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL6A2P12110 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.85□□□□□ -1.31
COL6A2P12110 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL6A2P12110 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL6A2P12110 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL6A2P12110 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
COL6A2P12110 AC020658.2-201ENST00000559030 4020 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 AL513185.3-201ENST00000433335 1300 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL6A2P12110 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL6A2P12110 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL6A2P12110 AL355377.1-201ENST00000621125 1653 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL6A2P12110 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
COL6A2P12110 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL6A2P12110 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL6A2P12110 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
COL6A2P12110 MIR513B-201ENST00000385136 84 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 AC090114.1-201ENST00000393266 448 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.85□□□□□ -1.31
COL6A2P12110 HSFY4P-201ENST00000415994 1181 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 VDAC1P10-201ENST00000416715 891 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL6A2P12110 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.85□□□□□ -1.31
COL6A2P12110 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.85□□□□□ -1.31
COL6A2P12110 CHCHD3P1-201ENST00000425516 676 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 AL160175.1-201ENST00000428124 247 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 HIGD1AP4-201ENST00000430194 280 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 RPL6P24-201ENST00000445338 864 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.85□□□□□ -1.31
COL6A2P12110 AC004022.1-201ENST00000447766 1066 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 MTND1P29-201ENST00000448112 647 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 AL627224.1-201ENST00000448334 444 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.85□□□□□ -1.31
COL6A2P12110 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.85□□□□□ -1.31
COL6A2P12110 OFD1P7Y-201ENST00000454643 1155 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC6.85□□□□□ -1.31
COL6A2P12110 NAP1L1P3-201ENST00000462291 880 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC6.85□□□□□ -1.31
COL6A2P12110 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL6A2P12110 RN7SL308P-201ENST00000464971 297 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.85□□□□□ -1.31
COL6A2P12110 AC091982.1-202ENST00000473923 343 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 AC079944.1-201ENST00000485426 495 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.85□□□□□ -1.31
COL6A2P12110 AC010374.1-201ENST00000503762 1237 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC6.85□□□□□ -1.31
COL6A2P12110 AC010486.3-201ENST00000511602 785 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.85□□□□□ -1.31
COL6A2P12110 AC087752.2-201ENST00000521219 281 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.85□□□□□ -1.31
COL6A2P12110 OR5M6P-201ENST00000530227 937 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 AP006587.5-201ENST00000532033 739 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms