Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.81□□□□□ -1.32
TPM1P09493 AC016908.1-201ENST00000442571 1219 ntBASIC6.81□□□□□ -1.32
TPM1P09493 AL121578.2-201ENST00000448797 447 ntBASIC6.81□□□□□ -1.32
TPM1P09493 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.81□□□□□ -1.32
TPM1P09493 OR5D2P-201ENST00000524390 911 ntBASIC6.81□□□□□ -1.32
TPM1P09493 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC6.81□□□□□ -1.32
TPM1P09493 RBMS2P1-201ENST00000525031 1226 ntBASIC6.81□□□□□ -1.32
TPM1P09493 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.81□□□□□ -1.32
TPM1P09493 OR6M2P-201ENST00000529831 871 ntBASIC6.81□□□□□ -1.32
TPM1P09493 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.81□□□□□ -1.32
TPM1P09493 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC6.81□□□□□ -1.32
TPM1P09493 RPL3P13-201ENST00000550415 216 ntBASIC6.81□□□□□ -1.32
TPM1P09493 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.81□□□□□ -1.32
TPM1P09493 AC005519.1-201ENST00000554490 601 ntBASIC6.81□□□□□ -1.32
TPM1P09493 AC027229.1-201ENST00000583887 253 ntBASIC6.81□□□□□ -1.32
TPM1P09493 MIR132-201ENST00000591554 101 ntBASIC6.81□□□□□ -1.32
TPM1P09493 RPS4XP21-201ENST00000603814 750 ntBASIC6.81□□□□□ -1.32
TPM1P09493 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.81□□□□□ -1.32
TPM1P09493 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.81□□□□□ -1.32
TPM1P09493 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.81□□□□□ -1.32
TPM1P09493 AC005702.3-201ENST00000585345 1447 ntBASIC6.81□□□□□ -1.32
TPM1P09493 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
TPM1P09493 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
TPM1P09493 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TPM1P09493 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
TPM1P09493 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
TPM1P09493 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.81□□□□□ -1.32
TPM1P09493 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
TPM1P09493 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TPM1P09493 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
TPM1P09493 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TPM1P09493 AC090220.1-201ENST00000593078 1699 ntBASIC6.81□□□□□ -1.32
TPM1P09493 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TPM1P09493 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TPM1P09493 QRSL1P3-201ENST00000552666 1316 ntBASIC6.8□□□□□ -1.32
TPM1P09493 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TPM1P09493 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
TPM1P09493 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.8□□□□□ -1.32
TPM1P09493 SNORD35A-201ENST00000363389 86 ntBASIC6.8□□□□□ -1.32
TPM1P09493 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TPM1P09493 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TPM1P09493 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.8□□□□□ -1.32
TPM1P09493 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.8□□□□□ -1.32
TPM1P09493 IGLV3-4-201ENST00000432300 244 ntBASIC6.8□□□□□ -1.32
TPM1P09493 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC6.8□□□□□ -1.32
TPM1P09493 AL731534.1-201ENST00000434711 269 ntBASIC6.8□□□□□ -1.32
TPM1P09493 AC019185.3-201ENST00000438805 323 ntBASIC6.8□□□□□ -1.32
TPM1P09493 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TPM1P09493 OSTCP1-201ENST00000455507 450 ntBASIC6.8□□□□□ -1.32
TPM1P09493 RN7SL352P-201ENST00000466002 277 ntBASIC6.8□□□□□ -1.32
TPM1P09493 RN7SL284P-201ENST00000498823 275 ntBASIC6.8□□□□□ -1.32
TPM1P09493 AC008945.1-201ENST00000505144 499 ntBASIC6.8□□□□□ -1.32
TPM1P09493 SCARNA11.1-201ENST00000516918 132 ntBASIC6.8□□□□□ -1.32
TPM1P09493 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.8□□□□□ -1.32
TPM1P09493 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.8□□□□□ -1.32
TPM1P09493 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TPM1P09493 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.8□□□□□ -1.32
TPM1P09493 AC026956.1-201ENST00000558741 396 ntBASIC6.8□□□□□ -1.32
TPM1P09493 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC6.8□□□□□ -1.32
TPM1P09493 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.8□□□□□ -1.32
TPM1P09493 FCGR1CP-201ENST00000579737 1127 ntBASIC6.8□□□□□ -1.32
TPM1P09493 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.8□□□□□ -1.32
TPM1P09493 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.8□□□□□ -1.32
TPM1P09493 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.8□□□□□ -1.32
TPM1P09493 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.8□□□□□ -1.32
TPM1P09493 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.8□□□□□ -1.32
TPM1P09493 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.8□□□□□ -1.32
TPM1P09493 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TPM1P09493 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TPM1P09493 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TPM1P09493 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
TPM1P09493 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
TPM1P09493 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TPM1P09493 AL449283.1-201ENST00000602631 3403 ntBASIC6.79□□□□□ -1.32
TPM1P09493 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
TPM1P09493 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TPM1P09493 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
TPM1P09493 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TPM1P09493 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.79□□□□□ -1.32
TPM1P09493 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
TPM1P09493 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TPM1P09493 RNA5SP453-201ENST00000362503 119 ntBASIC6.79□□□□□ -1.32
TPM1P09493 RNA5SP429-201ENST00000363688 109 ntBASIC6.79□□□□□ -1.32
TPM1P09493 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
TPM1P09493 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
TPM1P09493 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
TPM1P09493 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TPM1P09493 AL020997.1-201ENST00000446554 349 ntBASIC6.79□□□□□ -1.32
TPM1P09493 MORF4-201ENST00000447135 971 ntBASIC6.79□□□□□ -1.32
TPM1P09493 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.79□□□□□ -1.32
TPM1P09493 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.79□□□□□ -1.32
TPM1P09493 AKR1D1P1-201ENST00000457236 936 ntBASIC6.79□□□□□ -1.32
TPM1P09493 AC090602.1-201ENST00000469695 252 ntBASIC6.79□□□□□ -1.32
TPM1P09493 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.79□□□□□ -1.32
TPM1P09493 IGKV1D-32-201ENST00000517449 318 ntBASIC6.79□□□□□ -1.32
TPM1P09493 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.79□□□□□ -1.32
TPM1P09493 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.79□□□□□ -1.32
TPM1P09493 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.79□□□□□ -1.32
TPM1P09493 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
TPM1P09493 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms