Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.08□□□□□ -1.44
TNFP01375 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
TNFP01375 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TNFP01375 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
TNFP01375 RNA5SP333-201ENST00000363466 118 ntBASIC6.08□□□□□ -1.44
TNFP01375 RNA5SP334-201ENST00000364825 118 ntBASIC6.08□□□□□ -1.44
TNFP01375 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TNFP01375 AC097721.1-201ENST00000427150 1253 ntBASIC6.08□□□□□ -1.44
TNFP01375 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.08□□□□□ -1.44
TNFP01375 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.08□□□□□ -1.44
TNFP01375 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TNFP01375 AC016908.1-201ENST00000442571 1219 ntBASIC6.08□□□□□ -1.44
TNFP01375 GAPDHP23-201ENST00000444823 993 ntBASIC6.08□□□□□ -1.44
TNFP01375 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.08□□□□□ -1.44
TNFP01375 AC025458.1-201ENST00000506046 166 ntBASIC6.08□□□□□ -1.44
TNFP01375 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TNFP01375 AC092865.1-201ENST00000544395 1023 ntBASIC6.08□□□□□ -1.44
TNFP01375 AC007956.1-201ENST00000555623 542 ntBASIC6.08□□□□□ -1.44
TNFP01375 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.08□□□□□ -1.44
TNFP01375 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.08□□□□□ -1.44
TNFP01375 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.08□□□□□ -1.44
TNFP01375 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.08□□□□□ -1.44
TNFP01375 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.08□□□□□ -1.44
TNFP01375 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.08□□□□□ -1.44
TNFP01375 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.08□□□□□ -1.44
TNFP01375 AC108865.2-201ENST00000606881 432 ntBASIC6.08□□□□□ -1.44
TNFP01375 AC073488.3-201ENST00000631611 778 ntBASIC6.08□□□□□ -1.44
TNFP01375 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.08□□□□□ -1.44
TNFP01375 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
TNFP01375 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.08□□□□□ -1.44
TNFP01375 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.08□□□□□ -1.44
TNFP01375 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
TNFP01375 AC092821.3-202ENST00000641304 2767 ntBASIC6.08□□□□□ -1.44
TNFP01375 AL157831.2-201ENST00000564681 3095 ntBASIC6.08□□□□□ -1.44
TNFP01375 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.08□□□□□ -1.44
TNFP01375 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
TNFP01375 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.08□□□□□ -1.44
TNFP01375 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.08□□□□□ -1.44
TNFP01375 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
TNFP01375 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TNFP01375 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TNFP01375 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.08□□□□□ -1.44
TNFP01375 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.07□□□□□ -1.44
TNFP01375 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TNFP01375 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TNFP01375 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
TNFP01375 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.07□□□□□ -1.44
TNFP01375 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TNFP01375 AC127024.8-201ENST00000623719 2094 ntBASIC6.07□□□□□ -1.44
TNFP01375 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
TNFP01375 SNORA43.1-201ENST00000364863 140 ntBASIC6.07□□□□□ -1.44
TNFP01375 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.07□□□□□ -1.44
TNFP01375 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.07□□□□□ -1.44
TNFP01375 CYP4F30P-202ENST00000420048 405 ntBASIC6.07□□□□□ -1.44
TNFP01375 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.07□□□□□ -1.44
TNFP01375 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.07□□□□□ -1.44
TNFP01375 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.07□□□□□ -1.44
TNFP01375 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.07□□□□□ -1.44
TNFP01375 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.07□□□□□ -1.44
TNFP01375 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.07□□□□□ -1.44
TNFP01375 RPA2P1-201ENST00000556557 721 ntBASIC6.07□□□□□ -1.44
TNFP01375 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.07□□□□□ -1.44
TNFP01375 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC6.07□□□□□ -1.44
TNFP01375 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TNFP01375 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.07□□□□□ -1.44
TNFP01375 AC068768.2-201ENST00000602352 343 ntBASIC6.07□□□□□ -1.44
TNFP01375 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.07□□□□□ -1.44
TNFP01375 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.07□□□□□ -1.44
TNFP01375 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.07□□□□□ -1.44
TNFP01375 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TNFP01375 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TNFP01375 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TNFP01375 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.07□□□□□ -1.44
TNFP01375 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.07□□□□□ -1.44
TNFP01375 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TNFP01375 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.07□□□□□ -1.44
TNFP01375 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
TNFP01375 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.07□□□□□ -1.44
TNFP01375 EPS15P1-202ENST00000459691 2071 ntBASIC6.06□□□□□ -1.44
TNFP01375 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TNFP01375 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TNFP01375 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TNFP01375 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.06□□□□□ -1.44
TNFP01375 AC084782.1-201ENST00000564401 2465 ntBASIC6.06□□□□□ -1.44
TNFP01375 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TNFP01375 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.06□□□□□ -1.44
TNFP01375 AL731556.1-201ENST00000394628 3711 ntBASIC6.06□□□□□ -1.44
TNFP01375 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TNFP01375 AC022325.1-201ENST00000502748 2199 ntBASIC6.06□□□□□ -1.44
TNFP01375 AC011416.1-201ENST00000514947 1732 ntBASIC6.06□□□□□ -1.44
TNFP01375 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
TNFP01375 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TNFP01375 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
TNFP01375 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
TNFP01375 OR11H13P-201ENST00000359695 979 ntBASIC6.06□□□□□ -1.44
TNFP01375 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
TNFP01375 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TNFP01375 RNA5SP122-201ENST00000384457 108 ntBASIC6.06□□□□□ -1.44
TNFP01375 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.06□□□□□ -1.44
TNFP01375 HMGN1P20-201ENST00000411849 300 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms