Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SMAD6O43541 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.4□□□□□ -1.38
SMAD6O43541 AC134669.1-201ENST00000581275 672 ntBASIC6.4□□□□□ -1.38
SMAD6O43541 MIR4271-201ENST00000582451 67 ntBASIC6.4□□□□□ -1.38
SMAD6O43541 SNORA74.4-201ENST00000607595 199 ntBASIC6.4□□□□□ -1.38
SMAD6O43541 AL080312.2-201ENST00000613001 630 ntBASIC6.4□□□□□ -1.38
SMAD6O43541 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
SMAD6O43541 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC6.4□□□□□ -1.38
SMAD6O43541 AL512356.3-201ENST00000623005 461 ntBASIC6.4□□□□□ -1.38
SMAD6O43541 AC069542.2-201ENST00000624816 216 ntBASIC6.4□□□□□ -1.38
SMAD6O43541 AC009452.1-201ENST00000640823 606 ntBASIC6.4□□□□□ -1.38
SMAD6O43541 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.4□□□□□ -1.38
SMAD6O43541 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SMAD6O43541 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SMAD6O43541 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SMAD6O43541 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.4□□□□□ -1.39
SMAD6O43541 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.4□□□□□ -1.39
SMAD6O43541 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.4□□□□□ -1.39
SMAD6O43541 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SMAD6O43541 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SMAD6O43541 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SMAD6O43541 GUCY1B2-204ENST00000531898 1979 ntBASIC6.4□□□□□ -1.39
SMAD6O43541 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
SMAD6O43541 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.39
SMAD6O43541 AL391261.1-201ENST00000555712 1479 ntBASIC6.4□□□□□ -1.39
SMAD6O43541 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.4□□□□□ -1.39
SMAD6O43541 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SMAD6O43541 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
SMAD6O43541 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
SMAD6O43541 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.4□□□□□ -1.39
SMAD6O43541 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SMAD6O43541 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SMAD6O43541 PARP4P1-201ENST00000435945 2337 ntBASIC6.39□□□□□ -1.39
SMAD6O43541 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.39□□□□□ -1.39
SMAD6O43541 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
SMAD6O43541 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SMAD6O43541 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.39□□□□□ -1.39
SMAD6O43541 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SMAD6O43541 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SMAD6O43541 OR56A4-201ENST00000330728 1209 ntBASIC6.39□□□□□ -1.39
SMAD6O43541 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.39□□□□□ -1.39
SMAD6O43541 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SMAD6O43541 NPM1P10-201ENST00000398310 865 ntBASIC6.39□□□□□ -1.39
SMAD6O43541 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SMAD6O43541 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SMAD6O43541 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.39□□□□□ -1.39
SMAD6O43541 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SMAD6O43541 AC092967.1-201ENST00000449016 481 ntBASIC6.39□□□□□ -1.39
SMAD6O43541 VN1R38P-201ENST00000450265 887 ntBASIC6.39□□□□□ -1.39
SMAD6O43541 HMGB1P7-201ENST00000450921 612 ntBASIC6.39□□□□□ -1.39
SMAD6O43541 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.39□□□□□ -1.39
SMAD6O43541 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.39□□□□□ -1.39
SMAD6O43541 AC108103.1-201ENST00000511286 446 ntBASIC6.39□□□□□ -1.39
SMAD6O43541 SETP12-201ENST00000514068 805 ntBASIC6.39□□□□□ -1.39
SMAD6O43541 MAST4-IT1-201ENST00000514241 658 ntBASIC6.39□□□□□ -1.39
SMAD6O43541 AC006512.2-201ENST00000543250 486 ntBASIC6.39□□□□□ -1.39
SMAD6O43541 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.39□□□□□ -1.39
SMAD6O43541 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.39□□□□□ -1.39
SMAD6O43541 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.39□□□□□ -1.39
SMAD6O43541 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.39□□□□□ -1.39
SMAD6O43541 AC026826.3-201ENST00000561747 158 ntBASIC6.39□□□□□ -1.39
SMAD6O43541 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.39□□□□□ -1.39
SMAD6O43541 AP005136.2-201ENST00000583253 1049 ntBASIC6.39□□□□□ -1.39
SMAD6O43541 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.39□□□□□ -1.39
SMAD6O43541 AL499605.1-201ENST00000604628 403 ntBASIC6.39□□□□□ -1.39
SMAD6O43541 AL355816.2-201ENST00000610049 647 ntBASIC6.39□□□□□ -1.39
SMAD6O43541 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.39□□□□□ -1.39
SMAD6O43541 AC022106.1-201ENST00000612834 766 ntBASIC6.39□□□□□ -1.39
SMAD6O43541 AC241377.1-201ENST00000619797 406 ntBASIC6.39□□□□□ -1.39
SMAD6O43541 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.39□□□□□ -1.39
SMAD6O43541 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SMAD6O43541 MAPK10-287ENST00000641217 3037 ntBASIC6.39□□□□□ -1.39
SMAD6O43541 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SMAD6O43541 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
SMAD6O43541 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.39□□□□□ -1.39
SMAD6O43541 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.39□□□□□ -1.39
SMAD6O43541 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.39□□□□□ -1.39
SMAD6O43541 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SMAD6O43541 OR4G1P-202ENST00000641173 1788 ntBASIC6.39□□□□□ -1.39
SMAD6O43541 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SMAD6O43541 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SMAD6O43541 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SMAD6O43541 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SMAD6O43541 AC140479.2-201ENST00000421567 3130 ntBASIC6.39□□□□□ -1.39
SMAD6O43541 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
SMAD6O43541 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SMAD6O43541 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SMAD6O43541 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.38□□□□□ -1.39
SMAD6O43541 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
SMAD6O43541 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SMAD6O43541 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SMAD6O43541 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.38□□□□□ -1.39
SMAD6O43541 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SMAD6O43541 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.38□□□□□ -1.39
SMAD6O43541 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SMAD6O43541 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SMAD6O43541 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SMAD6O43541 FAM32BP-201ENST00000344033 333 ntBASIC6.38□□□□□ -1.39
SMAD6O43541 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.38□□□□□ -1.39
SMAD6O43541 AC007679.3-201ENST00000434035 414 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms