Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDLIM1O00151 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.05□□□□□ -1.44
PDLIM1O00151 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC6.05□□□□□ -1.44
PDLIM1O00151 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.05□□□□□ -1.44
PDLIM1O00151 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.05□□□□□ -1.44
PDLIM1O00151 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.05□□□□□ -1.44
PDLIM1O00151 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PDLIM1O00151 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.05□□□□□ -1.44
PDLIM1O00151 AC093325.1-201ENST00000508378 326 ntBASIC6.05□□□□□ -1.44
PDLIM1O00151 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.05□□□□□ -1.44
PDLIM1O00151 AC008868.1-201ENST00000509786 737 ntBASIC6.05□□□□□ -1.44
PDLIM1O00151 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.05□□□□□ -1.44
PDLIM1O00151 RNA5SP318-201ENST00000516352 92 ntBASIC6.05□□□□□ -1.44
PDLIM1O00151 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.05□□□□□ -1.44
PDLIM1O00151 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.05□□□□□ -1.44
PDLIM1O00151 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDLIM1O00151 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.05□□□□□ -1.44
PDLIM1O00151 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.05□□□□□ -1.44
PDLIM1O00151 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.05□□□□□ -1.44
PDLIM1O00151 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.05□□□□□ -1.44
PDLIM1O00151 AC068993.1-201ENST00000546724 589 ntBASIC6.05□□□□□ -1.44
PDLIM1O00151 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDLIM1O00151 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.05□□□□□ -1.44
PDLIM1O00151 AL359219.2-201ENST00000555184 348 ntBASIC6.05□□□□□ -1.44
PDLIM1O00151 MIR4312-201ENST00000579909 76 ntBASIC6.05□□□□□ -1.44
PDLIM1O00151 MIR4660-201ENST00000583549 74 ntBASIC6.05□□□□□ -1.44
PDLIM1O00151 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.05□□□□□ -1.44
PDLIM1O00151 AL049840.5-201ENST00000602827 552 ntBASIC6.05□□□□□ -1.44
PDLIM1O00151 AL591222.2-201ENST00000604443 754 ntBASIC6.05□□□□□ -1.44
PDLIM1O00151 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.05□□□□□ -1.44
PDLIM1O00151 AL137000.1-201ENST00000610528 1244 ntBASIC6.05□□□□□ -1.44
PDLIM1O00151 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PDLIM1O00151 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.05□□□□□ -1.44
PDLIM1O00151 AC018692.2-201ENST00000624130 348 ntBASIC6.05□□□□□ -1.44
PDLIM1O00151 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.05□□□□□ -1.44
PDLIM1O00151 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDLIM1O00151 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDLIM1O00151 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDLIM1O00151 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.05□□□□□ -1.44
PDLIM1O00151 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDLIM1O00151 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDLIM1O00151 AC009220.2-201ENST00000489759 1751 ntBASIC6.05□□□□□ -1.44
PDLIM1O00151 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PDLIM1O00151 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDLIM1O00151 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.05□□□□□ -1.44
PDLIM1O00151 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PDLIM1O00151 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
PDLIM1O00151 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDLIM1O00151 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
PDLIM1O00151 SHQ1P1-201ENST00000437111 1544 ntBASIC6.04□□□□□ -1.44
PDLIM1O00151 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM1O00151 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM1O00151 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM1O00151 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM1O00151 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM1O00151 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM1O00151 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM1O00151 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM1O00151 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM1O00151 AL079341.1-201ENST00000404701 1207 ntBASIC6.04□□□□□ -1.44
PDLIM1O00151 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.04□□□□□ -1.44
PDLIM1O00151 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.04□□□□□ -1.44
PDLIM1O00151 OR52N3P-201ENST00000413417 934 ntBASIC6.04□□□□□ -1.44
PDLIM1O00151 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM1O00151 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.04□□□□□ -1.44
PDLIM1O00151 AL590128.1-201ENST00000433407 286 ntBASIC6.04□□□□□ -1.44
PDLIM1O00151 AC096632.2-201ENST00000438139 1239 ntBASIC6.04□□□□□ -1.44
PDLIM1O00151 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.04□□□□□ -1.44
PDLIM1O00151 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM1O00151 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.04□□□□□ -1.44
PDLIM1O00151 AL022319.1-201ENST00000458183 1167 ntBASIC6.04□□□□□ -1.44
PDLIM1O00151 SNX18P26-201ENST00000458433 740 ntBASIC6.04□□□□□ -1.44
PDLIM1O00151 AC005165.2-201ENST00000466070 380 ntBASIC6.04□□□□□ -1.44
PDLIM1O00151 RN7SL390P-201ENST00000470634 284 ntBASIC6.04□□□□□ -1.44
PDLIM1O00151 RN7SL655P-201ENST00000486087 298 ntBASIC6.04□□□□□ -1.44
PDLIM1O00151 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.04□□□□□ -1.44
PDLIM1O00151 AC091965.3-201ENST00000506236 208 ntBASIC6.04□□□□□ -1.44
PDLIM1O00151 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.04□□□□□ -1.44
PDLIM1O00151 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.04□□□□□ -1.44
PDLIM1O00151 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.04□□□□□ -1.44
PDLIM1O00151 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
PDLIM1O00151 AP002004.1-206ENST00000532441 876 ntBASIC6.04□□□□□ -1.44
PDLIM1O00151 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.04□□□□□ -1.44
PDLIM1O00151 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.04□□□□□ -1.44
PDLIM1O00151 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.04□□□□□ -1.44
PDLIM1O00151 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM1O00151 COX6CP7-201ENST00000597056 208 ntBASIC6.04□□□□□ -1.44
PDLIM1O00151 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.04□□□□□ -1.44
PDLIM1O00151 AL049840.6-201ENST00000604583 345 ntBASIC6.04□□□□□ -1.44
PDLIM1O00151 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.04□□□□□ -1.44
PDLIM1O00151 AC022001.1-201ENST00000605193 268 ntBASIC6.04□□□□□ -1.44
PDLIM1O00151 U91328.4-201ENST00000608919 517 ntBASIC6.04□□□□□ -1.44
PDLIM1O00151 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM1O00151 MRPL57P3-201ENST00000619218 176 ntBASIC6.04□□□□□ -1.44
PDLIM1O00151 AC024884.1-201ENST00000620583 399 ntBASIC6.04□□□□□ -1.44
PDLIM1O00151 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM1O00151 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM1O00151 AL132640.3-201ENST00000630473 177 ntBASIC6.04□□□□□ -1.44
PDLIM1O00151 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.04□□□□□ -1.44
PDLIM1O00151 AC103703.1-201ENST00000634783 663 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms