Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 USP9YP2-201ENST00000504503 1000 ntBASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 AC108103.1-201ENST00000511286 446 ntBASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 USP9YP1-201ENST00000513521 1002 ntBASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 HSD3BP3-201ENST00000514706 994 ntBASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 AC073581.1-201ENST00000519036 575 ntBASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 AC005632.2-201ENST00000564271 828 ntBASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 MIR4433B-201ENST00000581329 102 ntBASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 AC125494.2-201ENST00000602431 657 ntBASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 AL157899.1-201ENST00000604110 936 ntBASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 AC097467.4-201ENST00000605504 141 ntBASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 AP001264.1-201ENST00000620602 703 ntBASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 MRPL57P1-201ENST00000621486 265 ntBASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 LINC02495-203ENST00000636704 242 ntBASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 TTC41P-205ENST00000551270 3963 ntBASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA2E9PIF3 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 RNA5SP350-201ENST00000363298 111 ntBASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 MTND2P12-201ENST00000417560 1252 ntBASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 RPL7AP14-201ENST00000424041 802 ntBASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 MGAT2P1-201ENST00000449718 797 ntBASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 AC091874.2-201ENST00000505889 720 ntBASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 AC091965.3-201ENST00000506236 208 ntBASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 AP003080.1-202ENST00000526526 915 ntBASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 AL133399.1-201ENST00000527476 298 ntBASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 AC006512.2-201ENST00000543250 486 ntBASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 AC004232.2-201ENST00000574245 821 ntBASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 DYNLL1P1-201ENST00000595442 269 ntBASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 OR7A11P-201ENST00000597719 953 ntBASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 AC079315.1-201ENST00000602952 623 ntBASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 MIR6861-201ENST00000618657 64 ntBASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 MIR6811-201ENST00000620409 58 ntBASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 OLMALINC-203ENST00000641087 3779 ntBASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 CASC19-246ENST00000641625 1606 ntBASIC5.84□□□□□ -1.47
NPIPA2E9PIF3 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.84□□□□□ -1.48
NPIPA2E9PIF3 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.84□□□□□ -1.48
NPIPA2E9PIF3 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.84□□□□□ -1.48
NPIPA2E9PIF3 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NPIPA2E9PIF3 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.48
NPIPA2E9PIF3 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 PARP4P1-201ENST00000435945 2337 ntBASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms