Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 OR2AF1P-201ENST00000454899 889 ntBASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 RPS10P20-201ENST00000494130 463 ntBASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 H3F3AP3-201ENST00000497682 407 ntBASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 SNX18P25-201ENST00000510539 758 ntBASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 AC008429.2-201ENST00000523057 864 ntBASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 AC023968.1-201ENST00000560719 475 ntBASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 AL158211.1-201ENST00000566763 763 ntBASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 AL138895.2-201ENST00000603019 178 ntBASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 AL596275.2-208ENST00000641192 594 ntBASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 AC008691.1-209ENST00000642094 814 ntBASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 AP001002.1-201ENST00000625148 1513 ntBASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC187A0A096LP49 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 AKAP17BP-201ENST00000431706 2719 ntBASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 RNA5SP188-201ENST00000362916 129 ntBASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 SNORA77.2-201ENST00000408571 112 ntBASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 AL359092.1-201ENST00000417156 265 ntBASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 RCC2P2-201ENST00000422174 918 ntBASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 OSTCP4-201ENST00000424397 449 ntBASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 CRYGGP-201ENST00000443337 145 ntBASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 GAPDHP16-201ENST00000448152 962 ntBASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 AC009963.3-201ENST00000458090 486 ntBASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 OR9N1P-201ENST00000491296 333 ntBASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 GM2AP2-201ENST00000491764 562 ntBASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 AC026826.1-201ENST00000493002 361 ntBASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 AC104629.1-201ENST00000494226 508 ntBASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 RPL19P11-201ENST00000495944 589 ntBASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 AC112225.1-201ENST00000508230 297 ntBASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 SCARNA5-201ENST00000516201 276 ntBASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 AL162632.2-201ENST00000553933 399 ntBASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 AL132657.2-201ENST00000564417 358 ntBASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 RN7SL208P-201ENST00000577964 296 ntBASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 OOSP1P2-201ENST00000579644 351 ntBASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 PPATP2-201ENST00000605635 508 ntBASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 AL139022.2-201ENST00000606934 443 ntBASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 AC097372.4-201ENST00000625025 466 ntBASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC187A0A096LP49 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms