Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MIR6085-201ENST00000618314 110 ntBASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 TTC41P-205ENST00000551270 3963 ntBASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 AC020633.1-201ENST00000468439 2247 ntBASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 AL391419.1-201ENST00000398901 1275 ntBASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 COL11A2P1-205ENST00000441798 676 ntBASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 AC063955.1-201ENST00000462872 685 ntBASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 MARK2P8-201ENST00000476069 952 ntBASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 AP003080.1-202ENST00000526526 915 ntBASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 IMMTP1-201ENST00000435590 2219 ntBASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 PROS2P-201ENST00000474651 1951 ntBASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 AOX3P-204ENST00000491025 2107 ntBASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDD3Q9Y3P4 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AC005702.3-201ENST00000585345 1447 ntBASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 RNU1-59P-201ENST00000364829 162 ntBASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 DPPA2P2-201ENST00000418220 897 ntBASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AL020997.1-201ENST00000446554 349 ntBASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 NPM1P9-201ENST00000453156 844 ntBASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 RPL31P11-202ENST00000454082 372 ntBASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AL022319.1-201ENST00000458183 1167 ntBASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 RN7SL83P-201ENST00000468131 297 ntBASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AC018639.1-201ENST00000492994 442 ntBASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AC105420.1-201ENST00000504389 582 ntBASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 IGKV1D-22-201ENST00000518953 324 ntBASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AC131935.1-201ENST00000524621 333 ntBASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 OR9G2P-201ENST00000533326 880 ntBASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 OR4A6P-201ENST00000534364 970 ntBASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AC027796.1-201ENST00000575593 512 ntBASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AC133552.4-201ENST00000576103 676 ntBASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AC090616.1-201ENST00000583895 447 ntBASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AC004805.3-201ENST00000603178 310 ntBASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms