Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AL121768.1-201ENST00000613917 2544 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AP001541.1-201ENST00000623322 1904 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 RPL31P11-201ENST00000426558 1558 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AC022306.1-201ENST00000560489 1562 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 MIR133A2-201ENST00000347538 102 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 RNU1-59P-201ENST00000364829 162 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 RPS26P38-201ENST00000414476 348 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 REREP1Y-201ENST00000422655 198 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AL157884.1-201ENST00000424561 454 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AC092106.2-201ENST00000436597 487 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 REREP2Y-201ENST00000439103 200 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AL136455.1-201ENST00000441083 1240 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AL845321.1-201ENST00000444603 348 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AL020997.1-201ENST00000446554 349 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AC090602.1-201ENST00000469695 252 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AC114940.1-201ENST00000512162 1265 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AC007066.2-202ENST00000566531 914 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AC010287.1-201ENST00000566916 357 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AC090651.1-201ENST00000567865 634 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AC027229.1-201ENST00000583887 253 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AC004805.3-201ENST00000603178 310 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AC002069.2-201ENST00000603580 883 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 U1.25-201ENST00000614085 162 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 U1.34-201ENST00000618578 162 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 U1.31-201ENST00000620022 160 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AC117503.3-201ENST00000623811 601 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AC004656.1-201ENST00000568479 4951 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AC096921.2-201ENST00000561507 1916 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.6□□□□□ -1.51
COPS3Q9UNS2 AC004158.1-201ENST00000564508 4319 ntBASIC5.6□□□□□ -1.51
COPS3Q9UNS2 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COPS3Q9UNS2 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
COPS3Q9UNS2 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.59□□□□□ -1.51
COPS3Q9UNS2 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
COPS3Q9UNS2 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COPS3Q9UNS2 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COPS3Q9UNS2 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COPS3Q9UNS2 HDAC1P2-201ENST00000453661 1398 ntBASIC5.59□□□□□ -1.51
COPS3Q9UNS2 SAMM50P1-201ENST00000455403 1399 ntBASIC5.59□□□□□ -1.51
COPS3Q9UNS2 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
COPS3Q9UNS2 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
COPS3Q9UNS2 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COPS3Q9UNS2 AC092451.3-201ENST00000625067 1343 ntBASIC5.59□□□□□ -1.51
COPS3Q9UNS2 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.59□□□□□ -1.51
COPS3Q9UNS2 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
COPS3Q9UNS2 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.59□□□□□ -1.51
COPS3Q9UNS2 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
COPS3Q9UNS2 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
COPS3Q9UNS2 MIR433-201ENST00000384837 93 ntBASIC5.59□□□□□ -1.51
COPS3Q9UNS2 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COPS3Q9UNS2 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
COPS3Q9UNS2 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COPS3Q9UNS2 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.59□□□□□ -1.51
COPS3Q9UNS2 AC083862.1-201ENST00000427378 1242 ntBASIC5.59□□□□□ -1.51
COPS3Q9UNS2 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.59□□□□□ -1.51
COPS3Q9UNS2 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COPS3Q9UNS2 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms