Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 KIF4CP-201ENST00000422742 1279 ntBASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 OSTCP4-201ENST00000424397 449 ntBASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 AL590623.1-201ENST00000427864 105 ntBASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 MAPRE1P3-201ENST00000435438 796 ntBASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 RN7SL254P-201ENST00000460609 284 ntBASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 AC104339.1-201ENST00000465478 348 ntBASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 APOBEC3AP1-201ENST00000511396 287 ntBASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 TPRX1P1-201ENST00000557620 319 ntBASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 HMGN2P47-201ENST00000559378 272 ntBASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 MIR6721-201ENST00000617181 87 ntBASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 AC109809.1-201ENST00000619665 545 ntBASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 AL359694.2-201ENST00000567753 1615 ntBASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 SAGE3P-201ENST00000619800 1635 ntBASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 AC023245.2-201ENST00000530760 2978 ntBASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 AL449283.1-201ENST00000602631 3403 ntBASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
SYNPO2Q9UMS6 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 AL050335.1-201ENST00000396909 869 ntBASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 RN7SKP199-201ENST00000410325 305 ntBASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 AL035422.1-201ENST00000414193 397 ntBASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 AL157884.1-201ENST00000424561 454 ntBASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 RPL5P7-201ENST00000444235 813 ntBASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 AC021006.1-201ENST00000489849 553 ntBASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 PFN1P8-201ENST00000497012 543 ntBASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 AC119751.4-201ENST00000507498 357 ntBASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 ZNF519P4-201ENST00000514008 125 ntBASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 AC036111.2-201ENST00000533247 901 ntBASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 AC084121.1-201ENST00000533882 835 ntBASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 AC006512.2-201ENST00000543250 486 ntBASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 AL845552.1-201ENST00000556820 323 ntBASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 AC090616.1-201ENST00000583895 447 ntBASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 CLIC4P2-201ENST00000601934 717 ntBASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 AL953862.2-201ENST00000603089 820 ntBASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 AC020765.1-201ENST00000604296 328 ntBASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 AC048344.4-201ENST00000619744 527 ntBASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 AC097520.1-201ENST00000624435 385 ntBASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 AL357140.4-201ENST00000636827 412 ntBASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 AC092821.2-201ENST00000545710 2042 ntBASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SYNPO2Q9UMS6 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms