Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 OR11H13P-201ENST00000359695 979 ntBASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 RNA5SP172-201ENST00000365061 118 ntBASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 RNU6-31P-201ENST00000384388 108 ntBASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 AC090114.1-201ENST00000393266 448 ntBASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 PTMAP8-201ENST00000397729 342 ntBASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 GAPDHP73-201ENST00000423411 1007 ntBASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 AL356133.1-201ENST00000444762 372 ntBASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 RPL21P47-201ENST00000483696 477 ntBASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 SUMO2P5-201ENST00000506790 245 ntBASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 IGLV1-62-201ENST00000518003 441 ntBASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 NPM1P35-201ENST00000533043 868 ntBASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 MTCO2P2-201ENST00000591258 225 ntBASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 AC006927.2-201ENST00000639256 389 ntBASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 AP000641.1-201ENST00000531988 1639 ntBASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 AC079298.1-201ENST00000625026 1619 ntBASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 AL591848.4-201ENST00000567832 3472 ntBASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 CAP1P2-201ENST00000417455 1409 ntBASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 AC092111.2-201ENST00000611627 1414 ntBASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 AL512353.3-201ENST00000417517 1326 ntBASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 SEPT7P7-201ENST00000420492 1301 ntBASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 AC023886.2-201ENST00000321285 411 ntBASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 RNU6-252P-201ENST00000363232 107 ntBASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 FAM204BP-201ENST00000369171 701 ntBASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 RNU6-796P-201ENST00000391086 107 ntBASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 RNU2-17P-201ENST00000410290 190 ntBASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 RPSAP60-201ENST00000415403 880 ntBASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 AL589794.1-201ENST00000424971 390 ntBASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 AF274573.1-201ENST00000430535 494 ntBASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 AL604028.2-201ENST00000437848 788 ntBASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 FABP5P3-201ENST00000437960 408 ntBASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCM2LQ9NUG4 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms