Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MIR1275-201ENST00000408770 80 ntBASIC6.57□□□□□ -1.36
CISHQ9NSE2 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.57□□□□□ -1.36
CISHQ9NSE2 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.57□□□□□ -1.36
CISHQ9NSE2 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.57□□□□□ -1.36
CISHQ9NSE2 AL354707.3-201ENST00000427308 331 ntBASIC6.57□□□□□ -1.36
CISHQ9NSE2 HMGB1P7-201ENST00000450921 612 ntBASIC6.57□□□□□ -1.36
CISHQ9NSE2 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CISHQ9NSE2 AC104339.1-201ENST00000465478 348 ntBASIC6.57□□□□□ -1.36
CISHQ9NSE2 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.57□□□□□ -1.36
CISHQ9NSE2 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.57□□□□□ -1.36
CISHQ9NSE2 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.57□□□□□ -1.36
CISHQ9NSE2 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.57□□□□□ -1.36
CISHQ9NSE2 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.57□□□□□ -1.36
CISHQ9NSE2 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CISHQ9NSE2 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.57□□□□□ -1.36
CISHQ9NSE2 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.57□□□□□ -1.36
CISHQ9NSE2 AC009779.8-202ENST00000607990 932 ntBASIC6.57□□□□□ -1.36
CISHQ9NSE2 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.57□□□□□ -1.36
CISHQ9NSE2 RFPL4AP6-201ENST00000616792 846 ntBASIC6.57□□□□□ -1.36
CISHQ9NSE2 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.57□□□□□ -1.36
CISHQ9NSE2 AL596275.2-207ENST00000641188 675 ntBASIC6.57□□□□□ -1.36
CISHQ9NSE2 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.57□□□□□ -1.36
CISHQ9NSE2 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CISHQ9NSE2 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CISHQ9NSE2 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.57□□□□□ -1.36
CISHQ9NSE2 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.57□□□□□ -1.36
CISHQ9NSE2 AC022325.1-201ENST00000502748 2199 ntBASIC6.57□□□□□ -1.36
CISHQ9NSE2 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.57□□□□□ -1.36
CISHQ9NSE2 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CISHQ9NSE2 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CISHQ9NSE2 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CISHQ9NSE2 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CISHQ9NSE2 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
CISHQ9NSE2 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
CISHQ9NSE2 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.56□□□□□ -1.36
CISHQ9NSE2 AL360271.1-201ENST00000395679 510 ntBASIC6.56□□□□□ -1.36
CISHQ9NSE2 GCNT1P4-201ENST00000404096 329 ntBASIC6.56□□□□□ -1.36
CISHQ9NSE2 RN7SKP151-201ENST00000410230 316 ntBASIC6.56□□□□□ -1.36
CISHQ9NSE2 RNA5SP156-201ENST00000410250 110 ntBASIC6.56□□□□□ -1.36
CISHQ9NSE2 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.56□□□□□ -1.36
CISHQ9NSE2 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.56□□□□□ -1.36
CISHQ9NSE2 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.56□□□□□ -1.36
CISHQ9NSE2 AL512593.1-201ENST00000444758 779 ntBASIC6.56□□□□□ -1.36
CISHQ9NSE2 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.56□□□□□ -1.36
CISHQ9NSE2 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.56□□□□□ -1.36
CISHQ9NSE2 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.56□□□□□ -1.36
CISHQ9NSE2 AC021006.1-201ENST00000489849 553 ntBASIC6.56□□□□□ -1.36
CISHQ9NSE2 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CISHQ9NSE2 OR7E99P-201ENST00000505750 922 ntBASIC6.56□□□□□ -1.36
CISHQ9NSE2 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.56□□□□□ -1.36
CISHQ9NSE2 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.56□□□□□ -1.36
CISHQ9NSE2 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CISHQ9NSE2 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.56□□□□□ -1.36
CISHQ9NSE2 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.56□□□□□ -1.36
CISHQ9NSE2 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.56□□□□□ -1.36
CISHQ9NSE2 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.56□□□□□ -1.36
CISHQ9NSE2 GLYATL1P2-202ENST00000588046 902 ntBASIC6.56□□□□□ -1.36
CISHQ9NSE2 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.56□□□□□ -1.36
CISHQ9NSE2 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.56□□□□□ -1.36
CISHQ9NSE2 AC027334.1-201ENST00000603257 310 ntBASIC6.56□□□□□ -1.36
CISHQ9NSE2 RN7SL261P-201ENST00000613441 282 ntBASIC6.56□□□□□ -1.36
CISHQ9NSE2 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
CISHQ9NSE2 MIR6806-201ENST00000622141 64 ntBASIC6.56□□□□□ -1.36
CISHQ9NSE2 AL683826.1-201ENST00000624104 627 ntBASIC6.56□□□□□ -1.36
CISHQ9NSE2 CASC19-274ENST00000642018 970 ntBASIC6.56□□□□□ -1.36
CISHQ9NSE2 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CISHQ9NSE2 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CISHQ9NSE2 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.56□□□□□ -1.36
CISHQ9NSE2 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 AP003486.1-201ENST00000525716 3994 ntBASIC6.55□□□□□ -1.36
CISHQ9NSE2 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CISHQ9NSE2 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CISHQ9NSE2 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CISHQ9NSE2 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CISHQ9NSE2 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CISHQ9NSE2 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CISHQ9NSE2 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 SNORA21-201ENST00000362423 132 ntBASIC6.55□□□□□ -1.36
CISHQ9NSE2 RNA5SP375-201ENST00000362975 119 ntBASIC6.55□□□□□ -1.36
CISHQ9NSE2 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CISHQ9NSE2 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 RPL5P7-201ENST00000444235 813 ntBASIC6.55□□□□□ -1.36
CISHQ9NSE2 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CISHQ9NSE2 AC002553.3-201ENST00000453002 341 ntBASIC6.55□□□□□ -1.36
CISHQ9NSE2 RPL7L1P3-201ENST00000455249 689 ntBASIC6.55□□□□□ -1.36
CISHQ9NSE2 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 HSD3BP3-201ENST00000514706 994 ntBASIC6.55□□□□□ -1.36
CISHQ9NSE2 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CISHQ9NSE2 AC002519.2-203ENST00000567043 837 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms