Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 C1DP1-201ENST00000426049 402 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 AL022331.1-201ENST00000429025 477 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 RPL21P33-201ENST00000444831 484 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 C15orf40-202ENST00000451195 518 ntTSL 3 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 AC244505.3-201ENST00000454598 187 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 RN7SL89P-201ENST00000480252 283 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SSU72Q9NP77 RPL5P14-201ENST00000494197 878 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 AL031073.1-201ENST00000503029 1139 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 AC025465.1-201ENST00000503145 797 ntTSL 3 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 AC093281.1-201ENST00000514239 549 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 MAL2-207ENST00000522828 603 ntTSL 3 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 AC087280.1-201ENST00000530632 1003 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 AC024901.1-201ENST00000535764 718 ntTSL 3 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 ELOCP32-201ENST00000548625 324 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 AC234778.2-201ENST00000566241 354 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 AC006362.1-201ENST00000567392 174 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 AC002400.1-201ENST00000569310 726 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 EIF4A2P1-201ENST00000587313 1063 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SSU72Q9NP77 AP000403.1-201ENST00000603349 851 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SSU72Q9NP77 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SSU72Q9NP77 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SSU72Q9NP77 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 AC073862.4-201ENST00000622982 854 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 METAP1-212ENST00000625963 147 ntTSL 5 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 TTC38-207ENST00000629918 162 ntTSL 5 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SSU72Q9NP77 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SSU72Q9NP77 AC126474.2-201ENST00000623268 1750 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
SSU72Q9NP77 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 UGT2B27P-201ENST00000505092 1620 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SSU72Q9NP77 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SSU72Q9NP77 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SSU72Q9NP77 AL356317.1-201ENST00000396110 1436 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 AL391380.1-201ENST00000439300 1432 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 CR381670.1-201ENST00000624291 1693 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SSU72Q9NP77 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SSU72Q9NP77 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SSU72Q9NP77 PHF7-202ENST00000347025 1472 ntTSL 5 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 DDX43P1-201ENST00000510713 1763 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SSU72Q9NP77 RBMX2P2-201ENST00000257020 946 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
SSU72Q9NP77 RN7SKP63-201ENST00000363187 301 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 AC006511.2-201ENST00000388966 660 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SSU72Q9NP77 RAB5CP1-201ENST00000395972 580 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 RN7SKP131-201ENST00000410698 301 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 AC009413.1-201ENST00000414823 399 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 EIF4A1P1-201ENST00000420241 934 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 FDPSP1-201ENST00000424976 1071 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 MOB1AP1-201ENST00000430903 535 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms