Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 LINC00993-201ENST00000420453 540 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 TCEA1P3-201ENST00000443005 880 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 RPL7P36-201ENST00000444633 681 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 HMGB1P48-201ENST00000446155 598 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 SEPT14P24-201ENST00000447236 180 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 RAB28P3-201ENST00000448325 597 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 USP9YP12-201ENST00000450481 570 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 AL583843.1-201ENST00000456070 346 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 RN7SL549P-201ENST00000478997 282 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 AL358832.1-201ENST00000497800 389 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 AC010608.1-201ENST00000507964 275 ntTSL 4 BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 AC008868.1-201ENST00000509786 737 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 RN7SKP298-201ENST00000515950 94 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 RNU6-123P-201ENST00000516163 102 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 RNA5SP303-201ENST00000516192 130 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 AC023632.1-201ENST00000518463 375 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 AC087521.2-203ENST00000530450 593 ntTSL 4 BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 AC104046.1-201ENST00000559487 406 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 RN7SL66P-201ENST00000582099 264 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 AC060780.3-201ENST00000589464 80 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 AP001429.1-201ENST00000602568 530 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 IGKV2OR2-7-201ENST00000604652 304 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 AC090425.1-201ENST00000610007 140 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 PCMTD1P7-201ENST00000634506 357 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 AC092329.4-202ENST00000638174 1989 ntTSL 2 BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 ZNF215-202ENST00000414517 3257 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 CCT4P2-201ENST00000233836 1548 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 AP001350.1-201ENST00000601906 1524 ntBASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 AC037487.1-201ENST00000583416 2474 ntTSL 5 BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 SEC62-207ENST00000480708 1430 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 LPL-201ENST00000311322 3846 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 DNAH10-209ENST00000614082 3484 ntTSL 5 BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 KLRC1-203ENST00000408006 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
CNTNAP3Q9BZ76 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 AC096642.1-201ENST00000612055 2614 ntBASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 XRCC5-202ENST00000392133 3761 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 RCAN1-203ENST00000381135 2526 ntTSL 2 BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 SNORA63C-201ENST00000364578 129 ntBASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 Y_RNA.465-201ENST00000384293 102 ntBASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 AC098592.2-201ENST00000413158 265 ntBASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 RPL17P17-201ENST00000419491 557 ntBASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 MTCO2P12-201ENST00000427426 682 ntBASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 AL035458.1-201ENST00000433096 585 ntBASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 AL606534.2-201ENST00000436756 624 ntTSL 5 BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 PRKAG2-AS1-201ENST00000464464 382 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 AC022730.2-201ENST00000465359 452 ntBASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 AC010342.1-201ENST00000514047 877 ntBASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 SNORA81.2-201ENST00000516868 170 ntBASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 SCARNA11.1-201ENST00000516918 132 ntBASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 IGHVIII-82-201ENST00000522058 250 ntBASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 DEFB130C-202ENST00000530001 230 ntBASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 AP003119.1-201ENST00000533437 538 ntTSL 4 BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 HPRT1P3-201ENST00000539521 576 ntBASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 AP000619.1-201ENST00000540293 1000 ntBASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 RPL41-204ENST00000546591 699 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CNTNAP3Q9BZ76 HIGD1AP17-201ENST00000554576 276 ntBASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms