Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 NPIPB1P-202ENST00000588786 828 ntBASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 AC073333.2-201ENST00000603589 769 ntBASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 AC104307.1-201ENST00000616142 196 ntBASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 AC073592.7-201ENST00000623659 507 ntBASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 AL133243.2-201ENST00000610331 1621 ntBASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 RN7SKP292-201ENST00000365522 317 ntBASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 MT-RNR1-201ENST00000389680 954 ntBASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 AL500527.1-201ENST00000448532 255 ntBASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 AC011476.1-201ENST00000466725 307 ntBASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 AC117525.1-201ENST00000515228 503 ntBASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 Y_RNA.667-201ENST00000516212 107 ntBASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 AL512624.1-201ENST00000613638 469 ntBASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 AC126175.1-201ENST00000617041 758 ntBASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 AC245014.3-201ENST00000618589 347 ntBASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 AL109620.1-201ENST00000618738 1197 ntBASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 MIR8089-201ENST00000620165 82 ntBASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 AC012653.2-201ENST00000621880 420 ntBASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 AC018659.2-201ENST00000624690 715 ntBASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 CASC19-228ENST00000641414 1684 ntBASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RTFDC1Q9BY42 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 AL596244.1-201ENST00000567068 3779 ntBASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 AC011455.2-201ENST00000599320 3336 ntBASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 CLCA3P-203ENST00000490028 2781 ntBASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 RNU6-386P-201ENST00000362650 107 ntBASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 RNU1-46P-201ENST00000384425 164 ntBASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 AL161636.2-201ENST00000445179 927 ntBASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 AC073072.2-201ENST00000447425 348 ntBASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 AC002553.3-201ENST00000453002 341 ntBASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 CR383658.1-201ENST00000514609 734 ntBASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 RNA5SP438-201ENST00000516561 112 ntBASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 IGHV3-57-201ENST00000520143 280 ntBASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms