Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 CASC19-246ENST00000641625 1606 ntBASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 EIF3EP1-201ENST00000433978 1316 ntBASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 ZNF969P-201ENST00000510345 2341 ntBASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 AC011416.1-201ENST00000514947 1732 ntBASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 AC107977.1-201ENST00000355745 939 ntBASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 SNORD94-201ENST00000386037 137 ntBASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 RAB5CP1-201ENST00000395972 580 ntBASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 RN7SKP146-201ENST00000410242 334 ntBASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 OSTCP4-201ENST00000424397 449 ntBASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 PPIAP10-201ENST00000438675 458 ntBASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 RN7SL168P-201ENST00000463821 279 ntBASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 RN7SL502P-201ENST00000481857 290 ntBASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 RPL34P33-201ENST00000486062 334 ntBASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 Y_RNA.710-201ENST00000516975 110 ntBASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 AL390877.1-201ENST00000605704 214 ntBASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 AL359091.2-201ENST00000609303 556 ntBASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 OFD1P17-201ENST00000437639 3018 ntBASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RSPO3Q9BXY4 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 AC121334.1-201ENST00000396414 802 ntBASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 RPL23AP17-201ENST00000401064 499 ntBASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 RN7SKP108-201ENST00000411367 328 ntBASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 AL731534.1-201ENST00000434711 269 ntBASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 AL645939.3-201ENST00000435408 225 ntBASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 RPS18P1-201ENST00000447840 458 ntBASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 AL034369.1-201ENST00000453808 477 ntBASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 KHDC1P1-201ENST00000511053 508 ntBASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms