Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AL133371.3-201ENST00000556197 549 ntTSL 4 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 LINC00520-204ENST00000556417 778 ntTSL 3 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 AC018558.5-201ENST00000565840 952 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 ANP32BP1-202ENST00000568553 737 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 AC138915.2-201ENST00000569776 97 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 AC141257.3-201ENST00000572906 215 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 STARD6-204ENST00000584040 660 ntTSL 3 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 NAPA-AS1-202ENST00000594367 630 ntTSL 2 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 AC008622.1-201ENST00000597106 284 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 AC011816.2-201ENST00000607089 556 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 AC023983.2-201ENST00000608010 562 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
USB1Q9BQ65 FRG1HP-203ENST00000615326 593 ntTSL 3 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 AL355987.5-201ENST00000621585 411 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 AC009268.2-201ENST00000621925 457 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 TTK-211ENST00000627129 240 ntTSL 5 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 TNNT3-218ENST00000641787 924 ntAPPRIS ALT2 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 ERCC6-208ENST00000515869 3439 ntTSL 2 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 CCDC129-202ENST00000407970 3269 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
USB1Q9BQ65 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.14
USB1Q9BQ65 Z97832.2-201ENST00000605896 4261 ntBASIC7.9□□□□□ -1.15
USB1Q9BQ65 ENPP6-201ENST00000296741 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
USB1Q9BQ65 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC7.9□□□□□ -1.15
USB1Q9BQ65 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC7.9□□□□□ -1.15
USB1Q9BQ65 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC7.9□□□□□ -1.15
USB1Q9BQ65 MAPK10-232ENST00000515400 2076 ntTSL 5 BASIC7.9□□□□□ -1.15
USB1Q9BQ65 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
USB1Q9BQ65 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
USB1Q9BQ65 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USB1Q9BQ65 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 PDZPH1P-201ENST00000412514 1783 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USB1Q9BQ65 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
USB1Q9BQ65 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
USB1Q9BQ65 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 AC110769.2-201ENST00000602760 1548 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 C11orf44-201ENST00000317019 3547 ntTSL 2 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USB1Q9BQ65 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC7.89□□□□□ -1.15
USB1Q9BQ65 SLC8A1-203ENST00000403092 3178 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USB1Q9BQ65 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 CREM-208ENST00000361599 2170 ntTSL 5 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 FABP1-201ENST00000295834 555 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USB1Q9BQ65 KRTAP11-1-201ENST00000332378 912 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 OR8B4-201ENST00000356130 990 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 U8.3-201ENST00000363321 132 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 SUN5-203ENST00000375523 1153 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 FRG1JP-201ENST00000376334 931 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 RNU6-574P-201ENST00000384265 107 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 Y_RNA.474-201ENST00000384341 102 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 MED28P1-201ENST00000399158 571 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 SNORA11C-201ENST00000408532 129 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 Y_RNA.608-201ENST00000410647 95 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 MTCO2P5-201ENST00000422621 426 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 AP001062.2-201ENST00000426029 127 ntTSL 3 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 AL513175.1-201ENST00000431492 780 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 GAPDHP34-201ENST00000432112 823 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 AL137793.1-201ENST00000433734 599 ntTSL 3 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 SPAG11A-205ENST00000434307 777 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
USB1Q9BQ65 AL159166.1-201ENST00000437430 329 ntTSL 3 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 SKP1P1-201ENST00000438081 489 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 C4orf51-201ENST00000438731 932 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 SEPT14P3-201ENST00000439401 183 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 AC027124.1-201ENST00000440852 466 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 AL732372.2-207ENST00000445840 183 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 SEPT14P2-201ENST00000453405 183 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 AC013472.1-202ENST00000455081 558 ntTSL 3 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 ST13P18-201ENST00000456632 1027 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 AC092042.1-201ENST00000457115 509 ntTSL 3 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 LINC01411-202ENST00000506862 744 ntTSL 3 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 HMGB1P28-201ENST00000507778 552 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 SEPT14P4-201ENST00000513445 186 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 RNU6-264P-201ENST00000517134 104 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 IGLV3-29-201ENST00000520084 244 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 AP003467.2-201ENST00000520175 319 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 IGKV3-25-201ENST00000523155 253 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 FO082796.1-201ENST00000523795 183 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
USB1Q9BQ65 AC025423.3-201ENST00000541551 469 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 CACNA1C-AS3-201ENST00000543559 444 ntTSL 5 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 RPL23AP86-201ENST00000573796 541 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 snoZ6.4-201ENST00000581669 55 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 TTN-AS1-218ENST00000586452 828 ntTSL 5 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 VN1R107P-201ENST00000601784 209 ntBASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 236.5 ms