Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RPL7AP71-201ENST00000451120 739 ntBASIC5.53□□□□□ -1.52
SSX3Q99909 AC073476.1-201ENST00000452854 407 ntBASIC5.53□□□□□ -1.52
SSX3Q99909 OR7L1P-201ENST00000456181 380 ntBASIC5.53□□□□□ -1.52
SSX3Q99909 DEFB109A-201ENST00000482450 265 ntBASIC5.53□□□□□ -1.52
SSX3Q99909 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC5.53□□□□□ -1.52
SSX3Q99909 RPL5P33-201ENST00000487833 905 ntBASIC5.53□□□□□ -1.52
SSX3Q99909 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.53□□□□□ -1.52
SSX3Q99909 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC5.53□□□□□ -1.52
SSX3Q99909 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.53□□□□□ -1.52
SSX3Q99909 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.53□□□□□ -1.52
SSX3Q99909 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.53□□□□□ -1.52
SSX3Q99909 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.53□□□□□ -1.52
SSX3Q99909 EEF1B2P2-201ENST00000519625 676 ntBASIC5.53□□□□□ -1.52
SSX3Q99909 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC5.53□□□□□ -1.52
SSX3Q99909 AC025857.1-201ENST00000525252 377 ntBASIC5.53□□□□□ -1.52
SSX3Q99909 AP000662.1-201ENST00000530952 487 ntBASIC5.53□□□□□ -1.52
SSX3Q99909 AC016144.1-201ENST00000548175 1087 ntBASIC5.53□□□□□ -1.52
SSX3Q99909 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSX3Q99909 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC5.53□□□□□ -1.52
SSX3Q99909 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC5.53□□□□□ -1.52
SSX3Q99909 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC5.53□□□□□ -1.52
SSX3Q99909 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.53□□□□□ -1.52
SSX3Q99909 AC024267.2-201ENST00000582737 417 ntBASIC5.53□□□□□ -1.52
SSX3Q99909 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SSX3Q99909 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.53□□□□□ -1.52
SSX3Q99909 AC020914.7-201ENST00000594477 545 ntBASIC5.53□□□□□ -1.52
SSX3Q99909 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.53□□□□□ -1.52
SSX3Q99909 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.53□□□□□ -1.52
SSX3Q99909 DIMT1P1-201ENST00000603970 763 ntBASIC5.53□□□□□ -1.52
SSX3Q99909 AC004908.1-201ENST00000606572 541 ntBASIC5.53□□□□□ -1.52
SSX3Q99909 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.53□□□□□ -1.52
SSX3Q99909 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.53□□□□□ -1.52
SSX3Q99909 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC5.53□□□□□ -1.52
SSX3Q99909 AC127071.2-201ENST00000623293 527 ntBASIC5.53□□□□□ -1.52
SSX3Q99909 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
SSX3Q99909 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.53□□□□□ -1.52
SSX3Q99909 CLUHP10-201ENST00000631979 980 ntBASIC5.53□□□□□ -1.52
SSX3Q99909 AL512329.1-201ENST00000404600 1592 ntBASIC5.53□□□□□ -1.52
SSX3Q99909 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSX3Q99909 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SSX3Q99909 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SSX3Q99909 AC005332.9-201ENST00000620266 2921 ntBASIC5.53□□□□□ -1.52
SSX3Q99909 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SSX3Q99909 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSX3Q99909 AC013488.1-201ENST00000526618 1838 ntBASIC5.53□□□□□ -1.52
SSX3Q99909 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSX3Q99909 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.52□□□□□ -1.53
SSX3Q99909 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX3Q99909 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.52□□□□□ -1.53
SSX3Q99909 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSX3Q99909 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX3Q99909 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSX3Q99909 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSX3Q99909 AC112255.1-201ENST00000624070 2493 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC5.52□□□□□ -1.53
SSX3Q99909 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX3Q99909 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSX3Q99909 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX3Q99909 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.52□□□□□ -1.53
SSX3Q99909 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX3Q99909 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX3Q99909 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX3Q99909 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSX3Q99909 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX3Q99909 STAG3L4-201ENST00000352103 530 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX3Q99909 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC5.52□□□□□ -1.53
SSX3Q99909 AL391419.1-201ENST00000398901 1275 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.52□□□□□ -1.53
SSX3Q99909 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSX3Q99909 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.52□□□□□ -1.53
SSX3Q99909 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.52□□□□□ -1.53
SSX3Q99909 AC006509.1-201ENST00000420788 634 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.52□□□□□ -1.53
SSX3Q99909 AC021876.1-201ENST00000425959 359 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 BX119904.3-201ENST00000428194 957 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.52□□□□□ -1.53
SSX3Q99909 AL451136.1-201ENST00000435399 325 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 RPEP4-201ENST00000437636 602 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.52□□□□□ -1.53
SSX3Q99909 AC135721.2-201ENST00000464237 300 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 RN7SL70P-201ENST00000478322 302 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 AC096743.1-201ENST00000485172 319 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 SNX18P23-201ENST00000510867 677 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 AC010442.1-201ENST00000515583 816 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 AC021146.10-201ENST00000515628 706 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.52□□□□□ -1.53
SSX3Q99909 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC5.52□□□□□ -1.53
SSX3Q99909 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.52□□□□□ -1.53
SSX3Q99909 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.52□□□□□ -1.53
SSX3Q99909 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.52□□□□□ -1.53
SSX3Q99909 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.52□□□□□ -1.53
SSX3Q99909 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.52□□□□□ -1.53
SSX3Q99909 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.52□□□□□ -1.53
SSX3Q99909 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.52□□□□□ -1.53
SSX3Q99909 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.52□□□□□ -1.53
SSX3Q99909 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.52□□□□□ -1.53
SSX3Q99909 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms