Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 RPL7AP14-201ENST00000424041 802 ntBASIC8.67□□□□□ -1.02
CCDC7Q96M83 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CCDC7Q96M83 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC8.67□□□□□ -1.02
CCDC7Q96M83 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC8.67□□□□□ -1.02
CCDC7Q96M83 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC8.67□□□□□ -1.02
CCDC7Q96M83 OR13K1P-201ENST00000444577 975 ntBASIC8.67□□□□□ -1.02
CCDC7Q96M83 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CCDC7Q96M83 PPIAP27-201ENST00000453800 265 ntBASIC8.67□□□□□ -1.02
CCDC7Q96M83 AC010343.2-201ENST00000510162 224 ntBASIC8.67□□□□□ -1.02
CCDC7Q96M83 SCARNA21.2-201ENST00000516600 166 ntBASIC8.67□□□□□ -1.02
CCDC7Q96M83 RNA5SP400-201ENST00000517155 111 ntBASIC8.67□□□□□ -1.02
CCDC7Q96M83 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC8.67□□□□□ -1.02
CCDC7Q96M83 AC092266.1-201ENST00000610958 165 ntBASIC8.67□□□□□ -1.02
CCDC7Q96M83 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
CCDC7Q96M83 MIR6886-201ENST00000619864 61 ntBASIC8.67□□□□□ -1.02
CCDC7Q96M83 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC8.67□□□□□ -1.02
CCDC7Q96M83 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC8.67□□□□□ -1.02
CCDC7Q96M83 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC8.67□□□□□ -1.02
CCDC7Q96M83 AP003175.1-201ENST00000641383 6658 ntBASIC8.67□□□□□ -1.02
CCDC7Q96M83 SHQ1P1-201ENST00000437111 1544 ntBASIC8.67□□□□□ -1.02
CCDC7Q96M83 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC8.67□□□□□ -1.02
CCDC7Q96M83 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CCDC7Q96M83 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CCDC7Q96M83 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
CCDC7Q96M83 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC8.66□□□□□ -1.02
CCDC7Q96M83 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CCDC7Q96M83 SLC9B1P1-201ENST00000331172 1337 ntBASIC8.66□□□□□ -1.02
CCDC7Q96M83 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
CCDC7Q96M83 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
CCDC7Q96M83 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CCDC7Q96M83 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CCDC7Q96M83 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
CCDC7Q96M83 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
CCDC7Q96M83 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CCDC7Q96M83 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CCDC7Q96M83 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC8.66□□□□□ -1.02
CCDC7Q96M83 SNORA51.9-201ENST00000384295 124 ntBASIC8.66□□□□□ -1.02
CCDC7Q96M83 CHEK2P5-201ENST00000423877 246 ntBASIC8.66□□□□□ -1.02
CCDC7Q96M83 AL512593.1-201ENST00000444758 779 ntBASIC8.66□□□□□ -1.02
CCDC7Q96M83 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC8.66□□□□□ -1.02
CCDC7Q96M83 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC8.66□□□□□ -1.02
CCDC7Q96M83 RN7SL214P-201ENST00000487317 265 ntBASIC8.66□□□□□ -1.02
CCDC7Q96M83 AC025458.1-201ENST00000506046 166 ntBASIC8.66□□□□□ -1.02
CCDC7Q96M83 AC106872.4-201ENST00000510050 523 ntBASIC8.66□□□□□ -1.02
CCDC7Q96M83 AC060775.1-201ENST00000518241 520 ntBASIC8.66□□□□□ -1.02
CCDC7Q96M83 NATP-201ENST00000523491 878 ntBASIC8.66□□□□□ -1.02
CCDC7Q96M83 AC027369.2-201ENST00000528030 440 ntBASIC8.66□□□□□ -1.02
CCDC7Q96M83 AC092865.1-201ENST00000544395 1023 ntBASIC8.66□□□□□ -1.02
CCDC7Q96M83 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC8.66□□□□□ -1.02
CCDC7Q96M83 LINC00556-201ENST00000569603 412 ntBASIC8.66□□□□□ -1.02
CCDC7Q96M83 AC008521.2-201ENST00000591021 259 ntBASIC8.66□□□□□ -1.02
CCDC7Q96M83 AC011445.2-201ENST00000599274 173 ntBASIC8.66□□□□□ -1.02
CCDC7Q96M83 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
CCDC7Q96M83 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
CCDC7Q96M83 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CCDC7Q96M83 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CCDC7Q96M83 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
CCDC7Q96M83 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC8.65□□□□□ -1.02
CCDC7Q96M83 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CCDC7Q96M83 WBP11P1-201ENST00000562560 1931 ntBASIC8.65□□□□□ -1.02
CCDC7Q96M83 HSPD1P8-201ENST00000400121 1658 ntBASIC8.65□□□□□ -1.02
CCDC7Q96M83 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC8.65□□□□□ -1.02
CCDC7Q96M83 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CCDC7Q96M83 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
CCDC7Q96M83 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CCDC7Q96M83 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CCDC7Q96M83 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CCDC7Q96M83 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC8.65□□□□□ -1.02
CCDC7Q96M83 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC8.65□□□□□ -1.02
CCDC7Q96M83 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CCDC7Q96M83 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CCDC7Q96M83 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CCDC7Q96M83 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CCDC7Q96M83 RN7SKP69-201ENST00000365390 305 ntBASIC8.65□□□□□ -1.02
CCDC7Q96M83 LYPLA1P3-201ENST00000402650 695 ntBASIC8.65□□□□□ -1.02
CCDC7Q96M83 RPL12P16-201ENST00000431098 498 ntBASIC8.65□□□□□ -1.02
CCDC7Q96M83 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC8.65□□□□□ -1.02
CCDC7Q96M83 RPL6P30-201ENST00000443382 862 ntBASIC8.65□□□□□ -1.02
CCDC7Q96M83 RBMY2AP-201ENST00000445405 1157 ntBASIC8.65□□□□□ -1.02
CCDC7Q96M83 AL590004.3-202ENST00000445883 451 ntBASIC8.65□□□□□ -1.02
CCDC7Q96M83 RBMY2CP-201ENST00000448575 1157 ntBASIC8.65□□□□□ -1.02
CCDC7Q96M83 RBMY2DP-202ENST00000448881 1157 ntBASIC8.65□□□□□ -1.02
CCDC7Q96M83 RBMY2BP-202ENST00000451071 1156 ntBASIC8.65□□□□□ -1.02
CCDC7Q96M83 AC073594.1-201ENST00000462065 364 ntBASIC8.65□□□□□ -1.02
CCDC7Q96M83 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC8.65□□□□□ -1.02
CCDC7Q96M83 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC8.65□□□□□ -1.02
CCDC7Q96M83 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC8.65□□□□□ -1.02
CCDC7Q96M83 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CCDC7Q96M83 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CCDC7Q96M83 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC8.65□□□□□ -1.02
CCDC7Q96M83 RNU4ATAC-201ENST00000580972 127 ntBASIC8.65□□□□□ -1.02
CCDC7Q96M83 SNORA74.4-201ENST00000607595 199 ntBASIC8.65□□□□□ -1.02
CCDC7Q96M83 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC8.65□□□□□ -1.02
CCDC7Q96M83 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC8.65□□□□□ -1.02
CCDC7Q96M83 FO681491.1-202ENST00000623392 737 ntBASIC8.65□□□□□ -1.02
CCDC7Q96M83 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC8.65□□□□□ -1.02
CCDC7Q96M83 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC8.65□□□□□ -1.02
CCDC7Q96M83 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC8.65□□□□□ -1.02
CCDC7Q96M83 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CCDC7Q96M83 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC8.65□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms