Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC099654.15-201ENST00000639802 509 ntBASIC5.4□□□□□ -1.54
AP3S1Q92572 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.4□□□□□ -1.55
AP3S1Q92572 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
AP3S1Q92572 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
AP3S1Q92572 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
AP3S1Q92572 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
AP3S1Q92572 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
AP3S1Q92572 AP005435.3-201ENST00000531260 3198 ntBASIC5.4□□□□□ -1.55
AP3S1Q92572 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.4□□□□□ -1.55
AP3S1Q92572 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
AP3S1Q92572 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
AP3S1Q92572 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
AP3S1Q92572 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
AP3S1Q92572 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.39□□□□□ -1.55
AP3S1Q92572 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.39□□□□□ -1.55
AP3S1Q92572 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
AP3S1Q92572 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.39□□□□□ -1.55
AP3S1Q92572 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
AP3S1Q92572 OR5E1P-201ENST00000305754 927 ntBASIC5.39□□□□□ -1.55
AP3S1Q92572 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
AP3S1Q92572 RN7SKP69-201ENST00000365390 305 ntBASIC5.39□□□□□ -1.55
AP3S1Q92572 MIR197-201ENST00000384976 75 ntBASIC5.39□□□□□ -1.55
AP3S1Q92572 PEX12P1-201ENST00000400284 1048 ntBASIC5.39□□□□□ -1.55
AP3S1Q92572 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
AP3S1Q92572 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.39□□□□□ -1.55
AP3S1Q92572 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC5.39□□□□□ -1.55
AP3S1Q92572 RPS10P3-201ENST00000439253 494 ntBASIC5.39□□□□□ -1.55
AP3S1Q92572 CUBNP2-201ENST00000443534 1139 ntBASIC5.39□□□□□ -1.55
AP3S1Q92572 RPL23AP60-201ENST00000450011 454 ntBASIC5.39□□□□□ -1.55
AP3S1Q92572 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC5.39□□□□□ -1.55
AP3S1Q92572 AC008026.1-201ENST00000460492 447 ntBASIC5.39□□□□□ -1.55
AP3S1Q92572 AC079193.1-201ENST00000460497 588 ntBASIC5.39□□□□□ -1.55
AP3S1Q92572 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.39□□□□□ -1.55
AP3S1Q92572 AC022730.1-201ENST00000473114 568 ntBASIC5.39□□□□□ -1.55
AP3S1Q92572 AC005017.1-201ENST00000482002 490 ntBASIC5.39□□□□□ -1.55
AP3S1Q92572 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.39□□□□□ -1.55
AP3S1Q92572 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.39□□□□□ -1.55
AP3S1Q92572 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC5.39□□□□□ -1.55
AP3S1Q92572 AP005902.2-201ENST00000518393 307 ntBASIC5.39□□□□□ -1.55
AP3S1Q92572 AC009729.1-201ENST00000548873 1133 ntBASIC5.39□□□□□ -1.55
AP3S1Q92572 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.39□□□□□ -1.55
AP3S1Q92572 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.39□□□□□ -1.55
AP3S1Q92572 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.39□□□□□ -1.55
AP3S1Q92572 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.39□□□□□ -1.55
AP3S1Q92572 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
AP3S1Q92572 AC002069.2-201ENST00000603580 883 ntBASIC5.39□□□□□ -1.55
AP3S1Q92572 Metazoa_SRP.180-201ENST00000612546 322 ntBASIC5.39□□□□□ -1.55
AP3S1Q92572 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.39□□□□□ -1.55
AP3S1Q92572 pRNA.9-201ENST00000618609 89 ntBASIC5.39□□□□□ -1.55
AP3S1Q92572 AC096708.4-201ENST00000620563 552 ntBASIC5.39□□□□□ -1.55
AP3S1Q92572 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
AP3S1Q92572 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
AP3S1Q92572 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
AP3S1Q92572 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
AP3S1Q92572 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.39□□□□□ -1.55
AP3S1Q92572 LINC02019-201ENST00000608605 2060 ntBASIC5.39□□□□□ -1.55
AP3S1Q92572 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
AP3S1Q92572 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.39□□□□□ -1.55
AP3S1Q92572 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.39□□□□□ -1.55
AP3S1Q92572 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
AP3S1Q92572 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
AP3S1Q92572 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.39□□□□□ -1.55
AP3S1Q92572 ICE2P1-201ENST00000512800 1849 ntBASIC5.39□□□□□ -1.55
AP3S1Q92572 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
AP3S1Q92572 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.39□□□□□ -1.55
AP3S1Q92572 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
AP3S1Q92572 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP3S1Q92572 AL034546.1-201ENST00000623740 3693 ntBASIC5.38□□□□□ -1.55
AP3S1Q92572 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP3S1Q92572 AC009962.1-201ENST00000567327 3813 ntBASIC5.38□□□□□ -1.55
AP3S1Q92572 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP3S1Q92572 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP3S1Q92572 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP3S1Q92572 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
AP3S1Q92572 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
AP3S1Q92572 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
AP3S1Q92572 RN7SKP81-201ENST00000365603 331 ntBASIC5.38□□□□□ -1.55
AP3S1Q92572 RNA5SP187-201ENST00000384400 119 ntBASIC5.38□□□□□ -1.55
AP3S1Q92572 SNORA77.2-201ENST00000408571 112 ntBASIC5.38□□□□□ -1.55
AP3S1Q92572 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.38□□□□□ -1.55
AP3S1Q92572 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.38□□□□□ -1.55
AP3S1Q92572 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.38□□□□□ -1.55
AP3S1Q92572 RPSAP59-201ENST00000421048 890 ntBASIC5.38□□□□□ -1.55
AP3S1Q92572 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.38□□□□□ -1.55
AP3S1Q92572 AL049820.1-201ENST00000442936 423 ntTSL 2 BASIC5.38□□□□□ -1.55
AP3S1Q92572 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.38□□□□□ -1.55
AP3S1Q92572 AC023271.1-201ENST00000445936 1090 ntBASIC5.38□□□□□ -1.55
AP3S1Q92572 MORF4-201ENST00000447135 971 ntBASIC5.38□□□□□ -1.55
AP3S1Q92572 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.38□□□□□ -1.55
AP3S1Q92572 RN7SL197P-201ENST00000466981 299 ntBASIC5.38□□□□□ -1.55
AP3S1Q92572 ADAMTS9-AS2-204ENST00000485174 573 ntTSL 4 BASIC5.38□□□□□ -1.55
AP3S1Q92572 RN7SL714P-201ENST00000487050 298 ntBASIC5.38□□□□□ -1.55
AP3S1Q92572 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.38□□□□□ -1.55
AP3S1Q92572 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.38□□□□□ -1.55
AP3S1Q92572 AC010442.1-201ENST00000515583 816 ntBASIC5.38□□□□□ -1.55
AP3S1Q92572 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.38□□□□□ -1.55
AP3S1Q92572 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
AP3S1Q92572 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.38□□□□□ -1.55
AP3S1Q92572 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
AP3S1Q92572 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms