Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 RN7SKP184-201ENST00000362348 333 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 Y_RNA.11-201ENST00000362375 109 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 RN7SKP63-201ENST00000363187 301 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 YWHAZP4-201ENST00000392459 708 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 KRT18P52-201ENST00000404956 846 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 MIR548F1-201ENST00000408667 84 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 GAS8-AS1-201ENST00000408886 435 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 FIGN-202ENST00000409634 746 ntTSL 5 BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 RN7SKP221-201ENST00000410420 301 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 RN7SKP131-201ENST00000410698 301 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 CNOT7P1-201ENST00000429006 852 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 AC023271.1-201ENST00000445936 1090 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 AL118496.2-201ENST00000448300 230 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 EPS15P1-201ENST00000448836 336 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 AL591379.2-201ENST00000450223 397 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 AL133480.2-201ENST00000456723 487 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 AF305872.1-201ENST00000485217 471 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 MTND2P33-201ENST00000506452 1031 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 AC008837.2-201ENST00000513076 418 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 NREP-223ENST00000515855 801 ntTSL 4 BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 RNU6-528P-201ENST00000516926 100 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 AP003392.2-201ENST00000527269 208 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 OR4A7P-201ENST00000531463 910 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 MIR3912-201ENST00000577566 105 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 AL589765.5-201ENST00000596133 515 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 BNIP3P26-201ENST00000600827 554 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 AC010385.2-201ENST00000603743 490 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 AC112230.1-201ENST00000604342 547 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 RPS28P1-201ENST00000604589 187 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 AC025594.3-201ENST00000613068 790 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 AC093909.6-201ENST00000624757 775 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 HGF-209ENST00000457544 2249 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 LRP4-AS1-201ENST00000502049 1504 ntTSL 2 BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 EIF4BP4-201ENST00000441847 1780 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 MAPK10-285ENST00000641207 2746 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 AC016582.1-202ENST00000636341 2982 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RNF135Q8IUD6 AC007923.2-201ENST00000584218 1591 ntBASIC8.27□□□□□ -1.09
RNF135Q8IUD6 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 LINC02035-201ENST00000610128 5476 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC005539.1-201ENST00000443768 1479 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 TARS2P1-201ENST00000506124 2041 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 ZEB2-205ENST00000419938 1755 ntTSL 2 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC022507.1-201ENST00000548349 1505 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 RNA5SP448-201ENST00000363151 111 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 RN7SKP211-201ENST00000363328 315 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 RNU2-66P-201ENST00000410650 161 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC010385.1-201ENST00000412374 256 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC023141.10-201ENST00000415634 200 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 PGAM1P3-201ENST00000420790 565 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 MTND1P2-201ENST00000430604 821 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC8.26□□□□□ -1.09
RNF135Q8IUD6 AC092170.1-201ENST00000440211 356 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 CNOT7P2-201ENST00000441051 832 ntBASIC8.26□□□□□ -1.09
RNF135Q8IUD6 ZNF619P1-201ENST00000446539 752 ntBASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms