Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.06□□□□□ -1.44
RIF1Q5UIP0 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.06□□□□□ -1.44
RIF1Q5UIP0 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.06□□□□□ -1.44
RIF1Q5UIP0 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.06□□□□□ -1.44
RIF1Q5UIP0 AP001496.3-201ENST00000580230 913 ntBASIC6.06□□□□□ -1.44
RIF1Q5UIP0 FAM27E4-201ENST00000605259 342 ntBASIC6.06□□□□□ -1.44
RIF1Q5UIP0 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
RIF1Q5UIP0 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RIF1Q5UIP0 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RIF1Q5UIP0 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
RIF1Q5UIP0 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
RIF1Q5UIP0 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RIF1Q5UIP0 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RIF1Q5UIP0 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RIF1Q5UIP0 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 AC090983.1-201ENST00000623426 3897 ntBASIC6.05□□□□□ -1.44
RIF1Q5UIP0 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 AC093278.2-201ENST00000564956 2485 ntBASIC6.05□□□□□ -1.44
RIF1Q5UIP0 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 Z84478.1-201ENST00000438230 1219 ntBASIC6.05□□□□□ -1.44
RIF1Q5UIP0 AC114755.4-201ENST00000439114 443 ntBASIC6.05□□□□□ -1.44
RIF1Q5UIP0 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 RPL7P39-201ENST00000481157 744 ntBASIC6.05□□□□□ -1.44
RIF1Q5UIP0 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 AC090958.1-201ENST00000511122 351 ntBASIC6.05□□□□□ -1.44
RIF1Q5UIP0 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 MIR4480-201ENST00000582492 71 ntBASIC6.05□□□□□ -1.44
RIF1Q5UIP0 AC005244.1-201ENST00000582566 339 ntBASIC6.05□□□□□ -1.44
RIF1Q5UIP0 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 RBMY1HP-201ENST00000382759 1389 ntBASIC6.05□□□□□ -1.44
RIF1Q5UIP0 AC022325.1-201ENST00000502748 2199 ntBASIC6.05□□□□□ -1.44
RIF1Q5UIP0 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 LPP-208ENST00000448637 5835 ntTSL 5 BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 MTND6P1-201ENST00000417434 424 ntBASIC6.05□□□□□ -1.44
RIF1Q5UIP0 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 AC012075.1-201ENST00000436549 580 ntBASIC6.05□□□□□ -1.44
RIF1Q5UIP0 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC6.05□□□□□ -1.44
RIF1Q5UIP0 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 AC005042.1-201ENST00000393397 800 ntBASIC6.04□□□□□ -1.44
RIF1Q5UIP0 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 PARP4P2-201ENST00000446672 3326 ntBASIC6.04□□□□□ -1.44
RIF1Q5UIP0 AL356981.1-201ENST00000454879 684 ntBASIC6.04□□□□□ -1.44
RIF1Q5UIP0 EXOC7P1-201ENST00000509881 2059 ntBASIC6.04□□□□□ -1.44
RIF1Q5UIP0 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 AC008115.4-201ENST00000619780 775 ntBASIC6.04□□□□□ -1.44
RIF1Q5UIP0 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 UG0898H09-202ENST00000623646 7040 ntBASIC6.04□□□□□ -1.44
RIF1Q5UIP0 CASC19-248ENST00000641674 1356 ntBASIC6.04□□□□□ -1.44
RIF1Q5UIP0 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 RNA5SP65-201ENST00000363166 119 ntBASIC6.04□□□□□ -1.44
RIF1Q5UIP0 RNU1-49P-201ENST00000363468 159 ntBASIC6.04□□□□□ -1.44
RIF1Q5UIP0 RNA5SP394-201ENST00000364216 119 ntBASIC6.04□□□□□ -1.44
RIF1Q5UIP0 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.04□□□□□ -1.44
RIF1Q5UIP0 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.04□□□□□ -1.44
RIF1Q5UIP0 AL390119.1-201ENST00000440329 312 ntBASIC6.04□□□□□ -1.44
RIF1Q5UIP0 SUMO2P10-201ENST00000452006 288 ntBASIC6.04□□□□□ -1.44
RIF1Q5UIP0 IGLV2-34-201ENST00000490007 283 ntBASIC6.04□□□□□ -1.44
RIF1Q5UIP0 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RIF1Q5UIP0 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 256.5 ms