Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SNAPC4Q5SXM2 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.82
SNAPC4Q5SXM2 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SNAPC4Q5SXM2 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.82
SNAPC4Q5SXM2 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
SNAPC4Q5SXM2 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC9.91□□□□□ -0.82
SNAPC4Q5SXM2 AC092017.2-201ENST00000427600 362 ntBASIC9.91□□□□□ -0.82
SNAPC4Q5SXM2 RPS17P15-201ENST00000475609 349 ntBASIC9.91□□□□□ -0.82
SNAPC4Q5SXM2 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC9.91□□□□□ -0.82
SNAPC4Q5SXM2 RNA5SP228-201ENST00000516232 133 ntBASIC9.91□□□□□ -0.82
SNAPC4Q5SXM2 OR5D15P-201ENST00000531671 942 ntBASIC9.91□□□□□ -0.82
SNAPC4Q5SXM2 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC9.91□□□□□ -0.82
SNAPC4Q5SXM2 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC9.91□□□□□ -0.82
SNAPC4Q5SXM2 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC9.91□□□□□ -0.82
SNAPC4Q5SXM2 AC141002.1-201ENST00000607025 279 ntBASIC9.91□□□□□ -0.82
SNAPC4Q5SXM2 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
SNAPC4Q5SXM2 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SNAPC4Q5SXM2 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC9.9□□□□□ -0.82
SNAPC4Q5SXM2 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SNAPC4Q5SXM2 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC9.9□□□□□ -0.82
SNAPC4Q5SXM2 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SNAPC4Q5SXM2 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SNAPC4Q5SXM2 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SNAPC4Q5SXM2 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
SNAPC4Q5SXM2 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SNAPC4Q5SXM2 ERG-205ENST00000398910 4954 ntTSL 5 BASIC9.9□□□□□ -0.82
SNAPC4Q5SXM2 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SNAPC4Q5SXM2 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
SNAPC4Q5SXM2 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SNAPC4Q5SXM2 OFD1P10Y-201ENST00000434110 1433 ntBASIC9.9□□□□□ -0.82
SNAPC4Q5SXM2 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
SNAPC4Q5SXM2 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC9.9□□□□□ -0.83
SNAPC4Q5SXM2 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
SNAPC4Q5SXM2 AL450996.1-201ENST00000445574 1202 ntBASIC9.9□□□□□ -0.83
SNAPC4Q5SXM2 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
SNAPC4Q5SXM2 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC9.9□□□□□ -0.83
SNAPC4Q5SXM2 RN7SL30P-201ENST00000488416 306 ntBASIC9.9□□□□□ -0.83
SNAPC4Q5SXM2 NPM1P27-201ENST00000502784 830 ntBASIC9.9□□□□□ -0.83
SNAPC4Q5SXM2 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC9.9□□□□□ -0.83
SNAPC4Q5SXM2 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC9.9□□□□□ -0.83
SNAPC4Q5SXM2 AP000662.1-201ENST00000530952 487 ntBASIC9.9□□□□□ -0.83
SNAPC4Q5SXM2 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC9.9□□□□□ -0.83
SNAPC4Q5SXM2 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC9.9□□□□□ -0.83
SNAPC4Q5SXM2 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC9.9□□□□□ -0.83
SNAPC4Q5SXM2 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
SNAPC4Q5SXM2 METTL15-211ENST00000634762 718 ntTSL 5 BASIC9.9□□□□□ -0.83
SNAPC4Q5SXM2 AC023421.1-201ENST00000590535 1785 ntBASIC9.9□□□□□ -0.83
SNAPC4Q5SXM2 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
SNAPC4Q5SXM2 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
SNAPC4Q5SXM2 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
SNAPC4Q5SXM2 AL355377.1-201ENST00000621125 1653 ntBASIC9.9□□□□□ -0.83
SNAPC4Q5SXM2 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 RPL37P18-201ENST00000411602 243 ntBASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 MRPL53P1-201ENST00000414323 319 ntBASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 NMD3P2-201ENST00000421815 761 ntBASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 CCNB1IP1P1-201ENST00000428976 839 ntBASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 CBX1P2-201ENST00000453841 458 ntBASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 FTH1P2-201ENST00000466086 412 ntBASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 SNORD91A-202ENST00000609620 191 ntBASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 AC005840.5-201ENST00000619166 599 ntBASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 MIR8080-201ENST00000622224 89 ntBASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC9.89□□□□□ -0.83
SNAPC4Q5SXM2 AC011379.1-201ENST00000508713 3025 ntBASIC9.88□□□□□ -0.83
SNAPC4Q5SXM2 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
SNAPC4Q5SXM2 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SNAPC4Q5SXM2 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC9.88□□□□□ -0.83
SNAPC4Q5SXM2 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SNAPC4Q5SXM2 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
SNAPC4Q5SXM2 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SNAPC4Q5SXM2 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SNAPC4Q5SXM2 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC9.88□□□□□ -0.83
SNAPC4Q5SXM2 RNU105B-201ENST00000364478 208 ntBASIC9.88□□□□□ -0.83
SNAPC4Q5SXM2 MIR550A3-201ENST00000390735 95 ntBASIC9.88□□□□□ -0.83
SNAPC4Q5SXM2 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC9.88□□□□□ -0.83
SNAPC4Q5SXM2 AL445928.1-201ENST00000435545 222 ntBASIC9.88□□□□□ -0.83
SNAPC4Q5SXM2 AC073850.1-201ENST00000449243 255 ntBASIC9.88□□□□□ -0.83
SNAPC4Q5SXM2 RANP1-206ENST00000455094 651 ntBASIC9.88□□□□□ -0.83
SNAPC4Q5SXM2 AC100832.1-201ENST00000471945 383 ntBASIC9.88□□□□□ -0.83
SNAPC4Q5SXM2 AC022215.1-201ENST00000481770 362 ntBASIC9.88□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms