Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SCN1BQ07699 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCN1BQ07699 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN1BQ07699 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN1BQ07699 AL512329.1-201ENST00000404600 1592 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.72□□□□□ -1.49
SCN1BQ07699 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.72□□□□□ -1.49
SCN1BQ07699 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SCN1BQ07699 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCN1BQ07699 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCN1BQ07699 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN1BQ07699 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN1BQ07699 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.72□□□□□ -1.49
SCN1BQ07699 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SCN1BQ07699 RNU6-1263P-201ENST00000384601 106 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN1BQ07699 RN7SKP137-201ENST00000411074 307 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCN1BQ07699 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCN1BQ07699 AC117434.1-201ENST00000419971 836 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.72□□□□□ -1.49
SCN1BQ07699 AL590399.2-201ENST00000427536 309 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 AL645936.2-201ENST00000430565 928 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 RPL12P16-201ENST00000431098 498 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 SLC25A24P1-202ENST00000434803 1220 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 MAPRE1P3-201ENST00000435438 796 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 AL138787.1-202ENST00000437804 898 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 OSTCP2-201ENST00000437956 444 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.72□□□□□ -1.49
SCN1BQ07699 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN1BQ07699 AL022237.1-201ENST00000446663 358 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC5.72□□□□□ -1.49
SCN1BQ07699 ST13P21-201ENST00000453250 1098 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC5.72□□□□□ -1.49
SCN1BQ07699 NMNAT1P3-201ENST00000457517 888 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 AL445687.2-201ENST00000458156 728 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 SNX18P26-201ENST00000458433 740 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 RPL5P15-201ENST00000475870 897 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCN1BQ07699 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.72□□□□□ -1.49
SCN1BQ07699 ENPP7P3-201ENST00000509123 241 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 SNX18P23-201ENST00000510867 677 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.72□□□□□ -1.49
SCN1BQ07699 AC097486.1-201ENST00000515331 210 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCN1BQ07699 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC5.72□□□□□ -1.49
SCN1BQ07699 PDCL3P1-201ENST00000534575 734 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.72□□□□□ -1.49
SCN1BQ07699 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.72□□□□□ -1.49
SCN1BQ07699 DUX4L52-201ENST00000549363 777 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 NF1P12-201ENST00000549593 583 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC5.72□□□□□ -1.49
SCN1BQ07699 OR4H6P-201ENST00000563771 921 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 AC090651.1-201ENST00000567865 634 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.72□□□□□ -1.49
SCN1BQ07699 AC233702.7-202ENST00000582941 211 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.72□□□□□ -1.49
SCN1BQ07699 MIR4428-201ENST00000584884 73 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC5.72□□□□□ -1.49
SCN1BQ07699 AL049829.3-202ENST00000604278 711 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC5.72□□□□□ -1.49
SCN1BQ07699 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.72□□□□□ -1.49
SCN1BQ07699 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.72□□□□□ -1.49
SCN1BQ07699 AC135068.11-201ENST00000636378 921 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 AC073869.7-201ENST00000640874 297 ntBASIC5.72□□□□□ -1.49
SCN1BQ07699 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN1BQ07699 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCN1BQ07699 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.72□□□□□ -1.49
SCN1BQ07699 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN1BQ07699 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SCN1BQ07699 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCN1BQ07699 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCN1BQ07699 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCN1BQ07699 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN1BQ07699 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
SCN1BQ07699 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN1BQ07699 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.49
SCN1BQ07699 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SCN1BQ07699 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SCN1BQ07699 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SCN1BQ07699 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SCN1BQ07699 RACGAP1P-201ENST00000550663 1879 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.71□□□□□ -1.5
SCN1BQ07699 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCN1BQ07699 AL080312.1-201ENST00000256654 824 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 OR10D1P-201ENST00000355343 936 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC5.71□□□□□ -1.5
SCN1BQ07699 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCN1BQ07699 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
SCN1BQ07699 RNA5SP35-201ENST00000391257 129 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.71□□□□□ -1.5
SCN1BQ07699 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCN1BQ07699 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC5.71□□□□□ -1.5
SCN1BQ07699 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.71□□□□□ -1.5
SCN1BQ07699 AL354868.1-201ENST00000417077 482 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 RPL7AP14-201ENST00000424041 802 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 GAPDHP57-201ENST00000424400 585 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 AC092651.1-201ENST00000426110 312 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms