Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC8.12□□□□□ -1.11
COL16A1Q07092 RN7SL97P-201ENST00000486780 299 ntBASIC8.12□□□□□ -1.11
COL16A1Q07092 AC072052.1-201ENST00000496556 306 ntBASIC8.12□□□□□ -1.11
COL16A1Q07092 AC008629.2-201ENST00000503783 483 ntBASIC8.12□□□□□ -1.11
COL16A1Q07092 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC8.12□□□□□ -1.11
COL16A1Q07092 AL512310.9-201ENST00000553311 948 ntBASIC8.12□□□□□ -1.11
COL16A1Q07092 AL359704.2-201ENST00000604335 521 ntBASIC8.12□□□□□ -1.11
COL16A1Q07092 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC8.12□□□□□ -1.11
COL16A1Q07092 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
COL16A1Q07092 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
COL16A1Q07092 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
COL16A1Q07092 AC005332.9-201ENST00000620266 2921 ntBASIC8.12□□□□□ -1.11
COL16A1Q07092 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
COL16A1Q07092 SRRM1P3-201ENST00000426911 2678 ntBASIC8.12□□□□□ -1.11
COL16A1Q07092 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
COL16A1Q07092 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
COL16A1Q07092 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC8.12□□□□□ -1.11
COL16A1Q07092 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
COL16A1Q07092 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC8.11□□□□□ -1.11
COL16A1Q07092 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC8.11□□□□□ -1.11
COL16A1Q07092 ADIG-201ENST00000373348 430 ntTSL 2 BASIC8.11□□□□□ -1.11
COL16A1Q07092 MIR765-201ENST00000390226 114 ntBASIC8.11□□□□□ -1.11
COL16A1Q07092 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
COL16A1Q07092 AC009804.1-201ENST00000400949 179 ntBASIC8.11□□□□□ -1.11
COL16A1Q07092 SNRPEP6-201ENST00000407465 277 ntBASIC8.11□□□□□ -1.11
COL16A1Q07092 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC8.11□□□□□ -1.11
COL16A1Q07092 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
COL16A1Q07092 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC8.11□□□□□ -1.11
COL16A1Q07092 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC8.11□□□□□ -1.11
COL16A1Q07092 EIF4EBP2P1-201ENST00000450009 343 ntBASIC8.11□□□□□ -1.11
COL16A1Q07092 AL157777.1-201ENST00000468100 304 ntBASIC8.11□□□□□ -1.11
COL16A1Q07092 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC8.11□□□□□ -1.11
COL16A1Q07092 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC8.11□□□□□ -1.11
COL16A1Q07092 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC8.11□□□□□ -1.11
COL16A1Q07092 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC8.11□□□□□ -1.11
COL16A1Q07092 AC137768.1-201ENST00000549998 553 ntBASIC8.11□□□□□ -1.11
COL16A1Q07092 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC8.11□□□□□ -1.11
COL16A1Q07092 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
COL16A1Q07092 LAPTM4BP2-201ENST00000604542 446 ntBASIC8.11□□□□□ -1.11
COL16A1Q07092 AC091953.3-201ENST00000623220 236 ntBASIC8.11□□□□□ -1.11
COL16A1Q07092 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC8.11□□□□□ -1.11
COL16A1Q07092 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
COL16A1Q07092 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
COL16A1Q07092 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
COL16A1Q07092 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
COL16A1Q07092 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
COL16A1Q07092 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.11□□□□□ -1.11
COL16A1Q07092 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
COL16A1Q07092 LRRC37A6P-202ENST00000448648 5444 ntBASIC8.11□□□□□ -1.11
COL16A1Q07092 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
COL16A1Q07092 AC119674.1-204ENST00000641348 1343 ntBASIC8.11□□□□□ -1.11
COL16A1Q07092 AC114786.1-201ENST00000512892 1415 ntBASIC8.11□□□□□ -1.11
COL16A1Q07092 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
COL16A1Q07092 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
COL16A1Q07092 AC010478.1-201ENST00000601500 6762 ntBASIC8.11□□□□□ -1.11
COL16A1Q07092 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
COL16A1Q07092 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
COL16A1Q07092 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC8.11□□□□□ -1.11
COL16A1Q07092 RNA5SP350-201ENST00000363298 111 ntBASIC8.11□□□□□ -1.11
COL16A1Q07092 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
COL16A1Q07092 RN7SKP29-201ENST00000410957 272 ntBASIC8.11□□□□□ -1.11
COL16A1Q07092 SLC35E1P1-201ENST00000419313 864 ntBASIC8.11□□□□□ -1.11
COL16A1Q07092 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC8.11□□□□□ -1.11
COL16A1Q07092 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC8.11□□□□□ -1.11
COL16A1Q07092 RAB28P2-201ENST00000454299 641 ntBASIC8.11□□□□□ -1.11
COL16A1Q07092 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC8.11□□□□□ -1.11
COL16A1Q07092 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC8.11□□□□□ -1.11
COL16A1Q07092 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC8.11□□□□□ -1.11
COL16A1Q07092 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
COL16A1Q07092 AP001922.4-201ENST00000526967 290 ntBASIC8.11□□□□□ -1.11
COL16A1Q07092 MIR3189-201ENST00000578735 73 ntBASIC8.11□□□□□ -1.11
COL16A1Q07092 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
COL16A1Q07092 AL022394.1-201ENST00000606979 292 ntBASIC8.11□□□□□ -1.11
COL16A1Q07092 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC8.11□□□□□ -1.11
COL16A1Q07092 AC131971.1-201ENST00000332881 1482 ntBASIC8.1□□□□□ -1.11
COL16A1Q07092 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC8.1□□□□□ -1.11
COL16A1Q07092 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
COL16A1Q07092 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
COL16A1Q07092 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
COL16A1Q07092 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC8.1□□□□□ -1.11
COL16A1Q07092 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC8.1□□□□□ -1.11
COL16A1Q07092 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC8.1□□□□□ -1.11
COL16A1Q07092 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
COL16A1Q07092 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC8.1□□□□□ -1.11
COL16A1Q07092 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
COL16A1Q07092 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
COL16A1Q07092 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
COL16A1Q07092 RPL23P2-201ENST00000320371 421 ntBASIC8.1□□□□□ -1.11
COL16A1Q07092 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
COL16A1Q07092 RNU4ATAC2P-201ENST00000408674 126 ntBASIC8.1□□□□□ -1.11
COL16A1Q07092 RN7SKP166-201ENST00000410812 305 ntBASIC8.1□□□□□ -1.11
COL16A1Q07092 EIF4A1P7-201ENST00000421800 1220 ntBASIC8.1□□□□□ -1.11
COL16A1Q07092 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC8.1□□□□□ -1.11
COL16A1Q07092 PA2G4P6-201ENST00000438325 1197 ntBASIC8.1□□□□□ -1.11
COL16A1Q07092 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC8.1□□□□□ -1.11
COL16A1Q07092 AC104164.1-201ENST00000460282 590 ntBASIC8.1□□□□□ -1.11
COL16A1Q07092 EIF1P7-201ENST00000487533 337 ntBASIC8.1□□□□□ -1.11
COL16A1Q07092 IGLV2-34-201ENST00000490007 283 ntBASIC8.1□□□□□ -1.11
COL16A1Q07092 PRELID3BP5-201ENST00000508612 460 ntBASIC8.1□□□□□ -1.11
COL16A1Q07092 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms