Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC062022.1-201ENST00000451026 1684 ntBASIC5.94□□□□□ -1.46
LTBQ06643 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.94□□□□□ -1.46
LTBQ06643 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.94□□□□□ -1.46
LTBQ06643 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 OR2AH1P-202ENST00000641232 2744 ntBASIC5.94□□□□□ -1.46
LTBQ06643 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 FANCD2P2-201ENST00000437591 1400 ntBASIC5.94□□□□□ -1.46
LTBQ06643 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
LTBQ06643 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.94□□□□□ -1.46
LTBQ06643 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.94□□□□□ -1.46
LTBQ06643 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 SNORA38B-201ENST00000363524 131 ntBASIC5.94□□□□□ -1.46
LTBQ06643 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.94□□□□□ -1.46
LTBQ06643 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.94□□□□□ -1.46
LTBQ06643 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC5.94□□□□□ -1.46
LTBQ06643 GAPDHP33-201ENST00000443168 1013 ntBASIC5.94□□□□□ -1.46
LTBQ06643 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.94□□□□□ -1.46
LTBQ06643 AC097359.1-201ENST00000447946 463 ntBASIC5.94□□□□□ -1.46
LTBQ06643 AC099340.1-201ENST00000475247 599 ntBASIC5.94□□□□□ -1.46
LTBQ06643 AP002884.1-201ENST00000479691 655 ntBASIC5.94□□□□□ -1.46
LTBQ06643 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.94□□□□□ -1.46
LTBQ06643 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.94□□□□□ -1.46
LTBQ06643 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.94□□□□□ -1.46
LTBQ06643 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.94□□□□□ -1.46
LTBQ06643 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.94□□□□□ -1.46
LTBQ06643 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.94□□□□□ -1.46
LTBQ06643 AC009879.1-201ENST00000520029 839 ntBASIC5.94□□□□□ -1.46
LTBQ06643 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
LTBQ06643 IGKV3D-34-201ENST00000522638 302 ntBASIC5.94□□□□□ -1.46
LTBQ06643 OR9G2P-201ENST00000533326 880 ntBASIC5.94□□□□□ -1.46
LTBQ06643 AC084121.1-201ENST00000533882 835 ntBASIC5.94□□□□□ -1.46
LTBQ06643 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.94□□□□□ -1.46
LTBQ06643 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.94□□□□□ -1.46
LTBQ06643 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.94□□□□□ -1.46
LTBQ06643 AC018558.5-201ENST00000565840 952 ntBASIC5.94□□□□□ -1.46
LTBQ06643 AC020978.7-201ENST00000575953 1187 ntBASIC5.94□□□□□ -1.46
LTBQ06643 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.94□□□□□ -1.46
LTBQ06643 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.94□□□□□ -1.46
LTBQ06643 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.94□□□□□ -1.46
LTBQ06643 AC097467.4-201ENST00000605504 141 ntBASIC5.94□□□□□ -1.46
LTBQ06643 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.94□□□□□ -1.46
LTBQ06643 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
LTBQ06643 AC025262.3-201ENST00000623666 360 ntBASIC5.94□□□□□ -1.46
LTBQ06643 AL035425.4-201ENST00000624509 1063 ntBASIC5.94□□□□□ -1.46
LTBQ06643 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.94□□□□□ -1.46
LTBQ06643 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.94□□□□□ -1.46
LTBQ06643 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.94□□□□□ -1.46
LTBQ06643 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
LTBQ06643 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 PSMC1P4-201ENST00000515236 1327 ntBASIC5.94□□□□□ -1.46
LTBQ06643 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.94□□□□□ -1.46
LTBQ06643 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.94□□□□□ -1.46
LTBQ06643 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.94□□□□□ -1.46
LTBQ06643 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LTBQ06643 AL731556.1-201ENST00000394628 3711 ntBASIC5.94□□□□□ -1.46
LTBQ06643 AC110716.2-201ENST00000563865 3945 ntBASIC5.93□□□□□ -1.46
LTBQ06643 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
LTBQ06643 AC010624.4-201ENST00000597606 1351 ntBASIC5.93□□□□□ -1.46
LTBQ06643 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
LTBQ06643 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LTBQ06643 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.93□□□□□ -1.46
LTBQ06643 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.93□□□□□ -1.46
LTBQ06643 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.93□□□□□ -1.46
LTBQ06643 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LTBQ06643 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
LTBQ06643 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.93□□□□□ -1.46
LTBQ06643 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LTBQ06643 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LTBQ06643 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
LTBQ06643 RNU1-5P-201ENST00000362684 144 ntBASIC5.93□□□□□ -1.46
LTBQ06643 RPL12P23-201ENST00000405880 490 ntBASIC5.93□□□□□ -1.46
LTBQ06643 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
LTBQ06643 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.93□□□□□ -1.46
LTBQ06643 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.93□□□□□ -1.46
LTBQ06643 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.93□□□□□ -1.46
LTBQ06643 AL356806.1-201ENST00000422524 916 ntBASIC5.93□□□□□ -1.46
LTBQ06643 HMGB1P32-201ENST00000425971 565 ntBASIC5.93□□□□□ -1.46
LTBQ06643 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.93□□□□□ -1.46
LTBQ06643 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.93□□□□□ -1.46
LTBQ06643 Z68868.1-201ENST00000429048 544 ntBASIC5.93□□□□□ -1.46
LTBQ06643 RPL12P16-201ENST00000431098 498 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms