Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL390198.2-201ENST00000510553 222 ntBASIC6.9□□□□□ -1.3
VCPP55072 AC108103.1-201ENST00000511286 446 ntBASIC6.9□□□□□ -1.3
VCPP55072 AC027369.2-201ENST00000528030 440 ntBASIC6.9□□□□□ -1.3
VCPP55072 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.9□□□□□ -1.3
VCPP55072 CYCSP38-201ENST00000559840 322 ntBASIC6.9□□□□□ -1.3
VCPP55072 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.9□□□□□ -1.3
VCPP55072 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.9□□□□□ -1.3
VCPP55072 AC005632.2-201ENST00000564271 828 ntBASIC6.9□□□□□ -1.3
VCPP55072 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.9□□□□□ -1.3
VCPP55072 AL589863.1-201ENST00000595383 631 ntBASIC6.9□□□□□ -1.3
VCPP55072 AC097467.4-201ENST00000605504 141 ntBASIC6.9□□□□□ -1.3
VCPP55072 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.9□□□□□ -1.3
VCPP55072 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
VCPP55072 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
VCPP55072 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
VCPP55072 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.9□□□□□ -1.31
VCPP55072 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
VCPP55072 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.9□□□□□ -1.31
VCPP55072 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
VCPP55072 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
VCPP55072 AL033543.1-201ENST00000623440 13454 ntBASIC6.9□□□□□ -1.31
VCPP55072 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
VCPP55072 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
VCPP55072 AC091305.2-201ENST00000624049 1576 ntBASIC6.9□□□□□ -1.31
VCPP55072 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.9□□□□□ -1.31
VCPP55072 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
VCPP55072 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
VCPP55072 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
VCPP55072 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VCPP55072 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VCPP55072 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.89□□□□□ -1.31
VCPP55072 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VCPP55072 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VCPP55072 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VCPP55072 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.89□□□□□ -1.31
VCPP55072 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
VCPP55072 SNORA38B-201ENST00000363524 131 ntBASIC6.89□□□□□ -1.31
VCPP55072 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.89□□□□□ -1.31
VCPP55072 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.89□□□□□ -1.31
VCPP55072 AL049697.3-201ENST00000406493 982 ntBASIC6.89□□□□□ -1.31
VCPP55072 AL353626.3-201ENST00000413399 657 ntBASIC6.89□□□□□ -1.31
VCPP55072 PNKDP1-201ENST00000435914 430 ntBASIC6.89□□□□□ -1.31
VCPP55072 NXT1P1-201ENST00000458481 316 ntBASIC6.89□□□□□ -1.31
VCPP55072 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.89□□□□□ -1.31
VCPP55072 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.89□□□□□ -1.31
VCPP55072 AC092824.1-201ENST00000483524 576 ntBASIC6.89□□□□□ -1.31
VCPP55072 AC008638.1-201ENST00000506035 866 ntBASIC6.89□□□□□ -1.31
VCPP55072 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.89□□□□□ -1.31
VCPP55072 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.89□□□□□ -1.31
VCPP55072 OR52H2P-201ENST00000514607 902 ntBASIC6.89□□□□□ -1.31
VCPP55072 KCTD9P4-201ENST00000526766 1166 ntBASIC6.89□□□□□ -1.31
VCPP55072 NPIPB14P-203ENST00000532298 987 ntBASIC6.89□□□□□ -1.31
VCPP55072 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.89□□□□□ -1.31
VCPP55072 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.89□□□□□ -1.31
VCPP55072 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VCPP55072 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.89□□□□□ -1.31
VCPP55072 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.89□□□□□ -1.31
VCPP55072 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.89□□□□□ -1.31
VCPP55072 AC026956.1-201ENST00000558741 396 ntBASIC6.89□□□□□ -1.31
VCPP55072 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VCPP55072 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.89□□□□□ -1.31
VCPP55072 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.89□□□□□ -1.31
VCPP55072 NPIPB1P-202ENST00000588786 828 ntBASIC6.89□□□□□ -1.31
VCPP55072 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.89□□□□□ -1.31
VCPP55072 AC137695.1-201ENST00000604126 489 ntBASIC6.89□□□□□ -1.31
VCPP55072 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.89□□□□□ -1.31
VCPP55072 AC073488.6-201ENST00000632293 754 ntBASIC6.89□□□□□ -1.31
VCPP55072 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VCPP55072 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VCPP55072 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VCPP55072 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VCPP55072 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.89□□□□□ -1.31
VCPP55072 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.89□□□□□ -1.31
VCPP55072 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
VCPP55072 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
VCPP55072 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
VCPP55072 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VCPP55072 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.89□□□□□ -1.31
VCPP55072 AC022034.1-201ENST00000512867 2156 ntBASIC6.89□□□□□ -1.31
VCPP55072 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VCPP55072 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VCPP55072 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VCPP55072 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VCPP55072 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VCPP55072 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
VCPP55072 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VCPP55072 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
VCPP55072 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
VCPP55072 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VCPP55072 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
VCPP55072 AC005332.9-201ENST00000620266 2921 ntBASIC6.88□□□□□ -1.31
VCPP55072 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
VCPP55072 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VCPP55072 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
VCPP55072 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
VCPP55072 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VCPP55072 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VCPP55072 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.88□□□□□ -1.31
VCPP55072 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
VCPP55072 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 314.5 ms