Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC097463.1-201ENST00000447288 481 ntBASIC6.19□□□□□ -1.42
PDX1P52945 PPIAP20-201ENST00000449839 135 ntBASIC6.19□□□□□ -1.42
PDX1P52945 AC009963.3-201ENST00000458090 486 ntBASIC6.19□□□□□ -1.42
PDX1P52945 AC084754.1-201ENST00000463466 464 ntBASIC6.19□□□□□ -1.42
PDX1P52945 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.19□□□□□ -1.42
PDX1P52945 RPL23AP68-201ENST00000480924 445 ntBASIC6.19□□□□□ -1.42
PDX1P52945 RPL12P30-201ENST00000488389 499 ntBASIC6.19□□□□□ -1.42
PDX1P52945 AP002453.1-201ENST00000492327 668 ntBASIC6.19□□□□□ -1.42
PDX1P52945 RBBP4P1-201ENST00000502424 1276 ntBASIC6.19□□□□□ -1.42
PDX1P52945 LSM3P4-201ENST00000502948 309 ntBASIC6.19□□□□□ -1.42
PDX1P52945 SNORA58-201ENST00000505219 137 ntBASIC6.19□□□□□ -1.42
PDX1P52945 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.19□□□□□ -1.42
PDX1P52945 AC087360.1-201ENST00000518788 616 ntBASIC6.19□□□□□ -1.42
PDX1P52945 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDX1P52945 IGHV3-57-201ENST00000520143 280 ntBASIC6.19□□□□□ -1.42
PDX1P52945 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDX1P52945 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.19□□□□□ -1.42
PDX1P52945 AC103968.1-201ENST00000557841 573 ntBASIC6.19□□□□□ -1.42
PDX1P52945 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
PDX1P52945 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.19□□□□□ -1.42
PDX1P52945 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.19□□□□□ -1.42
PDX1P52945 AL157899.1-201ENST00000604110 936 ntBASIC6.19□□□□□ -1.42
PDX1P52945 CYCSP1-201ENST00000604815 315 ntBASIC6.19□□□□□ -1.42
PDX1P52945 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.19□□□□□ -1.42
PDX1P52945 MIR6085-201ENST00000618314 110 ntBASIC6.19□□□□□ -1.42
PDX1P52945 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.19□□□□□ -1.42
PDX1P52945 AP001264.1-201ENST00000620602 703 ntBASIC6.19□□□□□ -1.42
PDX1P52945 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.19□□□□□ -1.42
PDX1P52945 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDX1P52945 AC023245.2-201ENST00000530760 2978 ntBASIC6.19□□□□□ -1.42
PDX1P52945 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.19□□□□□ -1.42
PDX1P52945 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
PDX1P52945 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
PDX1P52945 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
PDX1P52945 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.19□□□□□ -1.42
PDX1P52945 LYARP1-201ENST00000436977 1501 ntBASIC6.19□□□□□ -1.42
PDX1P52945 AC005034.3-201ENST00000604845 1747 ntBASIC6.19□□□□□ -1.42
PDX1P52945 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDX1P52945 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDX1P52945 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDX1P52945 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.18□□□□□ -1.42
PDX1P52945 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
PDX1P52945 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDX1P52945 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
PDX1P52945 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDX1P52945 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.18□□□□□ -1.42
PDX1P52945 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.18□□□□□ -1.42
PDX1P52945 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDX1P52945 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDX1P52945 AC005618.1-201ENST00000606901 3148 ntBASIC6.18□□□□□ -1.42
PDX1P52945 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDX1P52945 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
PDX1P52945 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.18□□□□□ -1.42
PDX1P52945 AL353743.3-201ENST00000442109 1468 ntBASIC6.18□□□□□ -1.42
PDX1P52945 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDX1P52945 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
PDX1P52945 SNORA51.9-201ENST00000384295 124 ntBASIC6.18□□□□□ -1.42
PDX1P52945 LYPLA1P3-201ENST00000402650 695 ntBASIC6.18□□□□□ -1.42
PDX1P52945 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.18□□□□□ -1.42
PDX1P52945 AC066692.1-201ENST00000421721 457 ntBASIC6.18□□□□□ -1.42
PDX1P52945 RPL23AP85-201ENST00000421838 433 ntBASIC6.18□□□□□ -1.42
PDX1P52945 IPPKP1-201ENST00000422501 768 ntBASIC6.18□□□□□ -1.42
PDX1P52945 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDX1P52945 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.18□□□□□ -1.42
PDX1P52945 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.18□□□□□ -1.42
PDX1P52945 AC068522.1-201ENST00000482895 345 ntBASIC6.18□□□□□ -1.42
PDX1P52945 RN7SL104P-201ENST00000498686 293 ntBASIC6.18□□□□□ -1.42
PDX1P52945 IGLVIV-64-201ENST00000518581 301 ntBASIC6.18□□□□□ -1.42
PDX1P52945 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.18□□□□□ -1.42
PDX1P52945 TRIM77BP-201ENST00000524985 1119 ntBASIC6.18□□□□□ -1.42
PDX1P52945 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.18□□□□□ -1.42
PDX1P52945 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.18□□□□□ -1.42
PDX1P52945 MRPS21P8-201ENST00000569196 235 ntBASIC6.18□□□□□ -1.42
PDX1P52945 AP005136.2-201ENST00000583253 1049 ntBASIC6.18□□□□□ -1.42
PDX1P52945 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.18□□□□□ -1.42
PDX1P52945 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.18□□□□□ -1.42
PDX1P52945 AL049840.6-202ENST00000603373 279 ntBASIC6.18□□□□□ -1.42
PDX1P52945 AL513218.1-201ENST00000606527 391 ntBASIC6.18□□□□□ -1.42
PDX1P52945 AL096712.1-201ENST00000614561 159 ntBASIC6.18□□□□□ -1.42
PDX1P52945 AL357153.4-201ENST00000620487 1016 ntBASIC6.18□□□□□ -1.42
PDX1P52945 AC024884.1-201ENST00000620583 399 ntBASIC6.18□□□□□ -1.42
PDX1P52945 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.18□□□□□ -1.42
PDX1P52945 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.18□□□□□ -1.42
PDX1P52945 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDX1P52945 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
PDX1P52945 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
PDX1P52945 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.18□□□□□ -1.42
PDX1P52945 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDX1P52945 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.18□□□□□ -1.42
PDX1P52945 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDX1P52945 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PDX1P52945 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDX1P52945 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDX1P52945 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.18□□□□□ -1.42
PDX1P52945 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
PDX1P52945 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDX1P52945 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.18□□□□□ -1.42
PDX1P52945 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PDX1P52945 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PDX1P52945 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms