Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.85□□□□□ -1.31
NEK3P51956 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.85□□□□□ -1.31
NEK3P51956 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.85□□□□□ -1.31
NEK3P51956 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.85□□□□□ -1.31
NEK3P51956 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.85□□□□□ -1.31
NEK3P51956 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NEK3P51956 AL354718.1-201ENST00000619764 589 ntBASIC6.85□□□□□ -1.31
NEK3P51956 AC019080.5-201ENST00000624891 757 ntBASIC6.85□□□□□ -1.31
NEK3P51956 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.85□□□□□ -1.31
NEK3P51956 AC027559.1-201ENST00000636288 271 ntBASIC6.85□□□□□ -1.31
NEK3P51956 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.85□□□□□ -1.31
NEK3P51956 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NEK3P51956 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.85□□□□□ -1.31
NEK3P51956 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NEK3P51956 AC068446.1-201ENST00000556425 1549 ntBASIC6.85□□□□□ -1.31
NEK3P51956 AC017002.4-201ENST00000604721 1525 ntBASIC6.85□□□□□ -1.31
NEK3P51956 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
NEK3P51956 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.85□□□□□ -1.31
NEK3P51956 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NEK3P51956 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
NEK3P51956 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
NEK3P51956 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.84□□□□□ -1.31
NEK3P51956 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.84□□□□□ -1.31
NEK3P51956 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
NEK3P51956 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.84□□□□□ -1.31
NEK3P51956 PARP4P1-201ENST00000435945 2337 ntBASIC6.84□□□□□ -1.31
NEK3P51956 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
NEK3P51956 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NEK3P51956 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NEK3P51956 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NEK3P51956 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.84□□□□□ -1.31
NEK3P51956 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC6.84□□□□□ -1.31
NEK3P51956 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
NEK3P51956 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NEK3P51956 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NEK3P51956 AL731556.1-201ENST00000394628 3711 ntBASIC6.84□□□□□ -1.31
NEK3P51956 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.84□□□□□ -1.31
NEK3P51956 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.84□□□□□ -1.31
NEK3P51956 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
NEK3P51956 UGT2B24P-201ENST00000514441 1597 ntBASIC6.84□□□□□ -1.31
NEK3P51956 RNA5SP474-201ENST00000391234 90 ntBASIC6.84□□□□□ -1.31
NEK3P51956 UBBP1-201ENST00000392399 473 ntBASIC6.84□□□□□ -1.31
NEK3P51956 FDPSP5-201ENST00000399474 1057 ntBASIC6.84□□□□□ -1.31
NEK3P51956 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NEK3P51956 AL033519.1-201ENST00000407266 307 ntBASIC6.84□□□□□ -1.31
NEK3P51956 CYCSP17-201ENST00000407870 315 ntBASIC6.84□□□□□ -1.31
NEK3P51956 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.84□□□□□ -1.31
NEK3P51956 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.84□□□□□ -1.31
NEK3P51956 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.84□□□□□ -1.31
NEK3P51956 PTP4A1P1-201ENST00000420539 515 ntBASIC6.84□□□□□ -1.31
NEK3P51956 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.84□□□□□ -1.31
NEK3P51956 PAICSP2-201ENST00000429118 1150 ntBASIC6.84□□□□□ -1.31
NEK3P51956 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
NEK3P51956 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.84□□□□□ -1.31
NEK3P51956 CRYGGP-201ENST00000443337 145 ntBASIC6.84□□□□□ -1.31
NEK3P51956 SNRPBP1-201ENST00000443634 282 ntBASIC6.84□□□□□ -1.31
NEK3P51956 AL445991.1-201ENST00000450381 475 ntBASIC6.84□□□□□ -1.31
NEK3P51956 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
NEK3P51956 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.84□□□□□ -1.31
NEK3P51956 RNA5SP116-201ENST00000516132 98 ntBASIC6.84□□□□□ -1.31
NEK3P51956 RN7SKP196-201ENST00000516267 345 ntBASIC6.84□□□□□ -1.31
NEK3P51956 AC067904.2-201ENST00000517322 1283 ntBASIC6.84□□□□□ -1.31
NEK3P51956 SNRPCP6-201ENST00000528310 210 ntBASIC6.84□□□□□ -1.31
NEK3P51956 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.84□□□□□ -1.31
NEK3P51956 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
NEK3P51956 AC134349.2-201ENST00000535136 910 ntBASIC6.84□□□□□ -1.31
NEK3P51956 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.84□□□□□ -1.31
NEK3P51956 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.84□□□□□ -1.31
NEK3P51956 AC140063.1-201ENST00000541343 259 ntBASIC6.84□□□□□ -1.31
NEK3P51956 DUX4L52-201ENST00000549363 777 ntBASIC6.84□□□□□ -1.31
NEK3P51956 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.84□□□□□ -1.31
NEK3P51956 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.84□□□□□ -1.31
NEK3P51956 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC6.84□□□□□ -1.31
NEK3P51956 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.84□□□□□ -1.31
NEK3P51956 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
NEK3P51956 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.84□□□□□ -1.31
NEK3P51956 MTND2P13-201ENST00000577438 1039 ntBASIC6.84□□□□□ -1.31
NEK3P51956 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.84□□□□□ -1.31
NEK3P51956 AC006328.2-201ENST00000623198 397 ntBASIC6.84□□□□□ -1.31
NEK3P51956 AC005514.1-201ENST00000623521 208 ntBASIC6.84□□□□□ -1.31
NEK3P51956 AC103798.2-201ENST00000624292 632 ntBASIC6.84□□□□□ -1.31
NEK3P51956 AC012005.2-201ENST00000624333 397 ntBASIC6.84□□□□□ -1.31
NEK3P51956 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.84□□□□□ -1.31
NEK3P51956 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
NEK3P51956 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NEK3P51956 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
NEK3P51956 SNX18P3-202ENST00000565670 1750 ntBASIC6.84□□□□□ -1.31
NEK3P51956 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
NEK3P51956 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.84□□□□□ -1.31
NEK3P51956 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
NEK3P51956 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
NEK3P51956 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
NEK3P51956 AL662795.2-201ENST00000624252 3706 ntBASIC6.84□□□□□ -1.32
NEK3P51956 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.84□□□□□ -1.32
NEK3P51956 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
NEK3P51956 AP002370.1-201ENST00000528055 1602 ntBASIC6.83□□□□□ -1.32
NEK3P51956 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NEK3P51956 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.83□□□□□ -1.32
NEK3P51956 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
NEK3P51956 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms