Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NKX2-1P43699 MSL3P1-202ENST00000440028 1468 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.25□□□□□ -1.57
NKX2-1P43699 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
NKX2-1P43699 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NKX2-1P43699 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
NKX2-1P43699 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.25□□□□□ -1.57
NKX2-1P43699 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NKX2-1P43699 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
NKX2-1P43699 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-1P43699 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.24□□□□□ -1.57
NKX2-1P43699 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
NKX2-1P43699 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.24□□□□□ -1.57
NKX2-1P43699 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
NKX2-1P43699 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-1P43699 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.24□□□□□ -1.57
NKX2-1P43699 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.24□□□□□ -1.57
NKX2-1P43699 AC092724.1-201ENST00000624623 3397 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
NKX2-1P43699 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.24□□□□□ -1.57
NKX2-1P43699 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
NKX2-1P43699 MTCO1P28-201ENST00000574177 1528 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-1P43699 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
NKX2-1P43699 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-1P43699 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
NKX2-1P43699 RNU6-618P-201ENST00000363518 112 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 RNU12-2P-201ENST00000364789 156 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.24□□□□□ -1.57
NKX2-1P43699 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.24□□□□□ -1.57
NKX2-1P43699 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-1P43699 NRIR-202ENST00000414795 506 ntTSL 3 BASIC5.24□□□□□ -1.57
NKX2-1P43699 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC5.24□□□□□ -1.57
NKX2-1P43699 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-1P43699 CLIC4P3-201ENST00000422221 752 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 MTND2P11-201ENST00000423638 648 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 AC017019.1-201ENST00000426129 261 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 AL590623.1-201ENST00000427864 105 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.24□□□□□ -1.57
NKX2-1P43699 BX005266.3-201ENST00000443013 1075 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.24□□□□□ -1.57
NKX2-1P43699 AC092421.1-201ENST00000448148 418 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 AL513343.1-201ENST00000451818 792 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.24□□□□□ -1.57
NKX2-1P43699 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.24□□□□□ -1.57
NKX2-1P43699 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.24□□□□□ -1.57
NKX2-1P43699 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.24□□□□□ -1.57
NKX2-1P43699 AC022336.1-201ENST00000475510 337 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.24□□□□□ -1.57
NKX2-1P43699 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC5.24□□□□□ -1.57
NKX2-1P43699 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.24□□□□□ -1.57
NKX2-1P43699 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.24□□□□□ -1.57
NKX2-1P43699 RNU6-319P-201ENST00000516025 108 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 IGKV2-19-201ENST00000518132 283 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 IGKV1D-22-201ENST00000518953 324 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC5.24□□□□□ -1.57
NKX2-1P43699 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC5.24□□□□□ -1.57
NKX2-1P43699 SSU72P6-201ENST00000532644 488 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.24□□□□□ -1.57
NKX2-1P43699 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-1P43699 LDHC-204ENST00000536880 957 ntTSL 5 BASIC5.24□□□□□ -1.57
NKX2-1P43699 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.24□□□□□ -1.57
NKX2-1P43699 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
NKX2-1P43699 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.24□□□□□ -1.57
NKX2-1P43699 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.24□□□□□ -1.57
NKX2-1P43699 PPIAP6-201ENST00000557078 499 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 AL731537.2-201ENST00000561565 951 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.24□□□□□ -1.57
NKX2-1P43699 MIR1273F-201ENST00000580581 99 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-1P43699 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.24□□□□□ -1.57
NKX2-1P43699 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-1P43699 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC5.24□□□□□ -1.57
NKX2-1P43699 EXOSC3P2-201ENST00000594464 497 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.24□□□□□ -1.57
NKX2-1P43699 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-1P43699 AL109620.1-201ENST00000618738 1197 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 AC004808.2-201ENST00000627965 773 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
NKX2-1P43699 AP001153.1-201ENST00000641024 338 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 AC119674.1-220ENST00000641502 1048 ntBASIC5.24□□□□□ -1.57
NKX2-1P43699 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-1P43699 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.24□□□□□ -1.57
NKX2-1P43699 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-1P43699 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-1P43699 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.24□□□□□ -1.57
NKX2-1P43699 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.24□□□□□ -1.57
NKX2-1P43699 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
NKX2-1P43699 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-1P43699 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-1P43699 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-1P43699 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
NKX2-1P43699 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX2-1P43699 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-1P43699 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-1P43699 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NKX2-1P43699 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
NKX2-1P43699 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
NKX2-1P43699 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms