Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.66□□□□□ -1.18
TM4SF1P30408 AC007066.2-202ENST00000566531 914 ntBASIC7.66□□□□□ -1.18
TM4SF1P30408 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.66□□□□□ -1.18
TM4SF1P30408 MIR4505-201ENST00000582238 73 ntBASIC7.66□□□□□ -1.18
TM4SF1P30408 AL049840.6-202ENST00000603373 279 ntBASIC7.66□□□□□ -1.18
TM4SF1P30408 AC239803.2-201ENST00000610161 430 ntBASIC7.66□□□□□ -1.18
TM4SF1P30408 AC018445.2-201ENST00000622987 260 ntBASIC7.66□□□□□ -1.18
TM4SF1P30408 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.66□□□□□ -1.18
TM4SF1P30408 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
TM4SF1P30408 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.66□□□□□ -1.18
TM4SF1P30408 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
TM4SF1P30408 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
TM4SF1P30408 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
TM4SF1P30408 AC012254.3-201ENST00000591183 2117 ntBASIC7.66□□□□□ -1.18
TM4SF1P30408 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TM4SF1P30408 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TM4SF1P30408 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TM4SF1P30408 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TM4SF1P30408 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TM4SF1P30408 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
TM4SF1P30408 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TM4SF1P30408 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.65□□□□□ -1.18
TM4SF1P30408 KIF4CP-201ENST00000422742 1279 ntBASIC7.65□□□□□ -1.18
TM4SF1P30408 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC7.65□□□□□ -1.18
TM4SF1P30408 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.65□□□□□ -1.18
TM4SF1P30408 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC7.65□□□□□ -1.18
TM4SF1P30408 SUMO2P1-206ENST00000445436 284 ntBASIC7.65□□□□□ -1.18
TM4SF1P30408 EIF4A1P6-201ENST00000448133 1210 ntBASIC7.65□□□□□ -1.18
TM4SF1P30408 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TM4SF1P30408 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
TM4SF1P30408 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
TM4SF1P30408 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC7.65□□□□□ -1.18
TM4SF1P30408 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC7.65□□□□□ -1.18
TM4SF1P30408 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.65□□□□□ -1.18
TM4SF1P30408 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.65□□□□□ -1.18
TM4SF1P30408 AC103968.1-201ENST00000557841 573 ntBASIC7.65□□□□□ -1.18
TM4SF1P30408 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.65□□□□□ -1.18
TM4SF1P30408 AC027229.1-201ENST00000583887 253 ntBASIC7.65□□□□□ -1.18
TM4SF1P30408 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC7.65□□□□□ -1.18
TM4SF1P30408 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC7.65□□□□□ -1.18
TM4SF1P30408 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.65□□□□□ -1.18
TM4SF1P30408 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.65□□□□□ -1.18
TM4SF1P30408 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC7.65□□□□□ -1.18
TM4SF1P30408 AC027279.4-201ENST00000624371 2072 ntBASIC7.65□□□□□ -1.18
TM4SF1P30408 AL691477.1-201ENST00000624398 162 ntBASIC7.65□□□□□ -1.18
TM4SF1P30408 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
TM4SF1P30408 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
TM4SF1P30408 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.65□□□□□ -1.19
TM4SF1P30408 MAPK10-261ENST00000641050 3109 ntBASIC7.65□□□□□ -1.19
TM4SF1P30408 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
TM4SF1P30408 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
TM4SF1P30408 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
TM4SF1P30408 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
TM4SF1P30408 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
TM4SF1P30408 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
TM4SF1P30408 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC7.64□□□□□ -1.19
TM4SF1P30408 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
TM4SF1P30408 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.64□□□□□ -1.19
TM4SF1P30408 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.64□□□□□ -1.19
TM4SF1P30408 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
TM4SF1P30408 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
TM4SF1P30408 CCDC162P-202ENST00000368966 6751 ntBASIC7.64□□□□□ -1.19
TM4SF1P30408 AC235565.1-201ENST00000456962 1325 ntBASIC7.64□□□□□ -1.19
TM4SF1P30408 RN7SKP77-201ENST00000363261 353 ntBASIC7.64□□□□□ -1.19
TM4SF1P30408 RNA5SP394-201ENST00000364216 119 ntBASIC7.64□□□□□ -1.19
TM4SF1P30408 RN7SKP128-201ENST00000364270 303 ntBASIC7.64□□□□□ -1.19
TM4SF1P30408 DPPA2P3-201ENST00000411853 655 ntBASIC7.64□□□□□ -1.19
TM4SF1P30408 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.64□□□□□ -1.19
TM4SF1P30408 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC7.64□□□□□ -1.19
TM4SF1P30408 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC7.64□□□□□ -1.19
TM4SF1P30408 AC009237.1-201ENST00000442127 744 ntBASIC7.64□□□□□ -1.19
TM4SF1P30408 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC7.64□□□□□ -1.19
TM4SF1P30408 ATG10-208ENST00000513634 618 ntTSL 2 BASIC7.64□□□□□ -1.19
TM4SF1P30408 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.64□□□□□ -1.19
TM4SF1P30408 AP006245.2-201ENST00000522004 300 ntBASIC7.64□□□□□ -1.19
TM4SF1P30408 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
TM4SF1P30408 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.64□□□□□ -1.19
TM4SF1P30408 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC7.64□□□□□ -1.19
TM4SF1P30408 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC7.64□□□□□ -1.19
TM4SF1P30408 AC139493.1-201ENST00000604368 397 ntBASIC7.64□□□□□ -1.19
TM4SF1P30408 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.64□□□□□ -1.19
TM4SF1P30408 AC141002.1-201ENST00000607025 279 ntBASIC7.64□□□□□ -1.19
TM4SF1P30408 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC7.64□□□□□ -1.19
TM4SF1P30408 AL445670.1-201ENST00000618889 801 ntBASIC7.64□□□□□ -1.19
TM4SF1P30408 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC7.64□□□□□ -1.19
TM4SF1P30408 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.64□□□□□ -1.19
TM4SF1P30408 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
TM4SF1P30408 AL136531.3-201ENST00000624378 3658 ntBASIC7.64□□□□□ -1.19
TM4SF1P30408 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.64□□□□□ -1.19
TM4SF1P30408 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
TM4SF1P30408 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
TM4SF1P30408 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
TM4SF1P30408 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
TM4SF1P30408 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
TM4SF1P30408 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
TM4SF1P30408 AC062029.1-202ENST00000606164 3651 ntBASIC7.64□□□□□ -1.19
TM4SF1P30408 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.64□□□□□ -1.19
TM4SF1P30408 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.64□□□□□ -1.19
TM4SF1P30408 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TM4SF1P30408 AC127070.3-201ENST00000503695 3263 ntBASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms