Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
ABCD3P28288 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ABCD3P28288 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
ABCD3P28288 OR2M1P-201ENST00000318104 951 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
ABCD3P28288 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ABCD3P28288 SNORD65-201ENST00000391079 73 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
ABCD3P28288 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
ABCD3P28288 USP9YP19-201ENST00000412165 485 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.08□□□□□ -1.44
ABCD3P28288 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.08□□□□□ -1.44
ABCD3P28288 DSTNP5-201ENST00000427921 523 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 Z68868.1-201ENST00000429048 544 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.08□□□□□ -1.44
ABCD3P28288 AL031681.1-201ENST00000443304 400 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.08□□□□□ -1.44
ABCD3P28288 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.08□□□□□ -1.44
ABCD3P28288 CCNJP1-201ENST00000450600 1149 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 AC239798.3-201ENST00000454459 408 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 AL139156.3-201ENST00000454802 394 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 CEACAMP11-201ENST00000455211 583 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 AC019084.1-201ENST00000457337 432 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.08□□□□□ -1.44
ABCD3P28288 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.08□□□□□ -1.44
ABCD3P28288 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.08□□□□□ -1.44
ABCD3P28288 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.08□□□□□ -1.44
ABCD3P28288 AC093870.1-201ENST00000506837 213 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ABCD3P28288 AC083906.1-201ENST00000509298 406 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.08□□□□□ -1.44
ABCD3P28288 IGHV3-57-201ENST00000520143 280 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.08□□□□□ -1.44
ABCD3P28288 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
ABCD3P28288 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.08□□□□□ -1.44
ABCD3P28288 AC092868.3-201ENST00000560515 784 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.08□□□□□ -1.44
ABCD3P28288 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.08□□□□□ -1.44
ABCD3P28288 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.08□□□□□ -1.44
ABCD3P28288 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.08□□□□□ -1.44
ABCD3P28288 AL953862.2-201ENST00000603089 820 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 AL359704.2-201ENST00000604335 521 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 AC114477.1-201ENST00000605097 605 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 AL445647.2-201ENST00000615170 130 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 AL133370.2-201ENST00000619934 439 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.08□□□□□ -1.44
ABCD3P28288 AC012653.2-201ENST00000621880 420 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 AC015722.2-201ENST00000622210 551 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 AC068213.1-201ENST00000625124 226 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.08□□□□□ -1.44
ABCD3P28288 AC073488.9-201ENST00000631601 754 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.08□□□□□ -1.44
ABCD3P28288 AC024341.1-201ENST00000526444 1552 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.08□□□□□ -1.44
ABCD3P28288 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
ABCD3P28288 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ABCD3P28288 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.08□□□□□ -1.44
ABCD3P28288 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
ABCD3P28288 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
ABCD3P28288 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ABCD3P28288 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
ABCD3P28288 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
ABCD3P28288 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ABCD3P28288 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ABCD3P28288 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
ABCD3P28288 MAPK10-357ENST00000641831 2858 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 AC010329.1-201ENST00000593903 8328 ntBASIC6.08□□□□□ -1.44
ABCD3P28288 AL355377.1-201ENST00000621125 1653 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 CASC19-228ENST00000641414 1684 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 FO082842.1-201ENST00000423552 1370 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.07□□□□□ -1.44
ABCD3P28288 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.07□□□□□ -1.44
ABCD3P28288 AP003486.1-201ENST00000525716 3994 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
ABCD3P28288 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
ABCD3P28288 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ABCD3P28288 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ABCD3P28288 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ABCD3P28288 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ABCD3P28288 RN7SKP188-201ENST00000410789 317 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 UBTFL2-201ENST00000411859 1191 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.07□□□□□ -1.44
ABCD3P28288 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.07□□□□□ -1.44
ABCD3P28288 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.07□□□□□ -1.44
ABCD3P28288 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC6.07□□□□□ -1.44
ABCD3P28288 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.07□□□□□ -1.44
ABCD3P28288 MTND4P15-201ENST00000437913 1033 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 COL11A2P1-205ENST00000441798 676 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 GAPDHP37-201ENST00000442317 968 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 AL356121.1-201ENST00000442911 156 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC6.07□□□□□ -1.44
ABCD3P28288 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.07□□□□□ -1.44
ABCD3P28288 AC073476.1-201ENST00000452854 407 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 EIF2S2P4-201ENST00000461070 984 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 RN7SL393P-201ENST00000463588 296 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 AC015524.1-201ENST00000491585 472 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 AC063943.2-201ENST00000495697 534 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms