Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.28□□□□□ -1.56
COL8A2P25067 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL8A2P25067 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
COL8A2P25067 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.28□□□□□ -1.56
COL8A2P25067 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
COL8A2P25067 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL8A2P25067 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL8A2P25067 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL8A2P25067 AL157831.2-201ENST00000564681 3095 ntBASIC5.28□□□□□ -1.56
COL8A2P25067 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL8A2P25067 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.28□□□□□ -1.56
COL8A2P25067 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
COL8A2P25067 HSPD1P9-201ENST00000420325 1636 ntBASIC5.28□□□□□ -1.56
COL8A2P25067 AC093829.1-201ENST00000506662 1618 ntBASIC5.28□□□□□ -1.56
COL8A2P25067 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL8A2P25067 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
COL8A2P25067 U3.43-201ENST00000410734 213 ntBASIC5.28□□□□□ -1.56
COL8A2P25067 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.28□□□□□ -1.56
COL8A2P25067 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.28□□□□□ -1.56
COL8A2P25067 PPIAP10-201ENST00000438675 458 ntBASIC5.28□□□□□ -1.56
COL8A2P25067 EIF5AP4-201ENST00000441206 465 ntBASIC5.28□□□□□ -1.56
COL8A2P25067 VN1R38P-201ENST00000450265 887 ntBASIC5.28□□□□□ -1.56
COL8A2P25067 PPIAP7-201ENST00000454070 489 ntBASIC5.28□□□□□ -1.56
COL8A2P25067 NDUFA5P5-201ENST00000468361 342 ntBASIC5.28□□□□□ -1.56
COL8A2P25067 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.28□□□□□ -1.56
COL8A2P25067 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.28□□□□□ -1.56
COL8A2P25067 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL8A2P25067 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.28□□□□□ -1.56
COL8A2P25067 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.28□□□□□ -1.56
COL8A2P25067 NATP-201ENST00000523491 878 ntBASIC5.28□□□□□ -1.56
COL8A2P25067 AP000620.1-201ENST00000527147 504 ntBASIC5.28□□□□□ -1.56
COL8A2P25067 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.28□□□□□ -1.56
COL8A2P25067 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC5.28□□□□□ -1.56
COL8A2P25067 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.28□□□□□ -1.56
COL8A2P25067 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.28□□□□□ -1.56
COL8A2P25067 AC090826.1-203ENST00000569235 490 ntBASIC5.28□□□□□ -1.56
COL8A2P25067 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.28□□□□□ -1.56
COL8A2P25067 AC005726.4-201ENST00000582858 458 ntBASIC5.28□□□□□ -1.56
COL8A2P25067 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.28□□□□□ -1.56
COL8A2P25067 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.28□□□□□ -1.56
COL8A2P25067 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.28□□□□□ -1.56
COL8A2P25067 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL8A2P25067 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.28□□□□□ -1.56
COL8A2P25067 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.28□□□□□ -1.56
COL8A2P25067 RFPL4AP6-201ENST00000616792 846 ntBASIC5.28□□□□□ -1.56
COL8A2P25067 MIR7159-201ENST00000620587 66 ntBASIC5.28□□□□□ -1.56
COL8A2P25067 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.28□□□□□ -1.56
COL8A2P25067 AL359742.1-201ENST00000622497 540 ntBASIC5.28□□□□□ -1.56
COL8A2P25067 AC073862.4-201ENST00000622982 854 ntBASIC5.28□□□□□ -1.56
COL8A2P25067 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
COL8A2P25067 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL8A2P25067 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.28□□□□□ -1.56
COL8A2P25067 AC093225.1-201ENST00000506867 1408 ntBASIC5.28□□□□□ -1.56
COL8A2P25067 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
COL8A2P25067 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
COL8A2P25067 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.28□□□□□ -1.56
COL8A2P25067 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
COL8A2P25067 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL8A2P25067 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL8A2P25067 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL8A2P25067 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
COL8A2P25067 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.28□□□□□ -1.56
COL8A2P25067 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL8A2P25067 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.28□□□□□ -1.56
COL8A2P25067 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL8A2P25067 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
COL8A2P25067 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.28□□□□□ -1.56
COL8A2P25067 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
COL8A2P25067 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.27□□□□□ -1.57
COL8A2P25067 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
COL8A2P25067 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
COL8A2P25067 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL8A2P25067 GUCY1B2-204ENST00000531898 1979 ntBASIC5.27□□□□□ -1.57
COL8A2P25067 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL8A2P25067 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL8A2P25067 MAPK10-270ENST00000641102 3538 ntBASIC5.27□□□□□ -1.57
COL8A2P25067 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.27□□□□□ -1.57
COL8A2P25067 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL8A2P25067 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL8A2P25067 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
COL8A2P25067 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.27□□□□□ -1.57
COL8A2P25067 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL8A2P25067 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL8A2P25067 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.27□□□□□ -1.57
COL8A2P25067 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL8A2P25067 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL8A2P25067 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
COL8A2P25067 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL8A2P25067 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL8A2P25067 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC5.27□□□□□ -1.57
COL8A2P25067 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.27□□□□□ -1.57
COL8A2P25067 FAM32BP-201ENST00000344033 333 ntBASIC5.27□□□□□ -1.57
COL8A2P25067 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL8A2P25067 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.27□□□□□ -1.57
COL8A2P25067 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL8A2P25067 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.27□□□□□ -1.57
COL8A2P25067 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.27□□□□□ -1.57
COL8A2P25067 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.27□□□□□ -1.57
COL8A2P25067 MTND6P8-201ENST00000503471 522 ntBASIC5.27□□□□□ -1.57
COL8A2P25067 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms