Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CFTRP13569 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC10.29□□□□□ -0.76
CFTRP13569 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC10.29□□□□□ -0.76
CFTRP13569 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC10.29□□□□□ -0.76
CFTRP13569 AL161756.3-201ENST00000641216 2071 ntBASIC10.29□□□□□ -0.76
CFTRP13569 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
CFTRP13569 AC103591.2-201ENST00000265259 766 ntBASIC10.29□□□□□ -0.76
CFTRP13569 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CFTRP13569 RNA5SP507-201ENST00000363603 121 ntBASIC10.29□□□□□ -0.76
CFTRP13569 RNA5SP478-201ENST00000364657 115 ntBASIC10.29□□□□□ -0.76
CFTRP13569 SNRPEP6-201ENST00000407465 277 ntBASIC10.29□□□□□ -0.76
CFTRP13569 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC10.29□□□□□ -0.76
CFTRP13569 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC10.29□□□□□ -0.76
CFTRP13569 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC10.29□□□□□ -0.76
CFTRP13569 RANP1-206ENST00000455094 651 ntBASIC10.29□□□□□ -0.76
CFTRP13569 CBX1P5-201ENST00000475330 559 ntBASIC10.29□□□□□ -0.76
CFTRP13569 AC109481.1-201ENST00000509173 282 ntBASIC10.29□□□□□ -0.76
CFTRP13569 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
CFTRP13569 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC10.29□□□□□ -0.76
CFTRP13569 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC10.29□□□□□ -0.76
CFTRP13569 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CFTRP13569 AL049872.1-201ENST00000556323 322 ntBASIC10.29□□□□□ -0.76
CFTRP13569 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC10.29□□□□□ -0.76
CFTRP13569 AC096996.1-201ENST00000563813 325 ntBASIC10.29□□□□□ -0.76
CFTRP13569 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC10.29□□□□□ -0.76
CFTRP13569 AL137246.2-201ENST00000613439 662 ntBASIC10.29□□□□□ -0.76
CFTRP13569 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CFTRP13569 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
CFTRP13569 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CFTRP13569 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CFTRP13569 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC10.28□□□□□ -0.76
CFTRP13569 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
CFTRP13569 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CFTRP13569 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
CFTRP13569 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
CFTRP13569 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CFTRP13569 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CFTRP13569 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC10.28□□□□□ -0.76
CFTRP13569 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CFTRP13569 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CFTRP13569 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CFTRP13569 RNA5SP350-201ENST00000363298 111 ntBASIC10.28□□□□□ -0.76
CFTRP13569 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC10.28□□□□□ -0.76
CFTRP13569 RN7SKP166-201ENST00000410812 305 ntBASIC10.28□□□□□ -0.76
CFTRP13569 GABARAPL3-201ENST00000412799 354 ntBASIC10.28□□□□□ -0.76
CFTRP13569 RPL23AP27-201ENST00000415161 451 ntBASIC10.28□□□□□ -0.76
CFTRP13569 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC10.28□□□□□ -0.76
CFTRP13569 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC10.28□□□□□ -0.76
CFTRP13569 AL355032.1-201ENST00000472981 438 ntBASIC10.28□□□□□ -0.76
CFTRP13569 RNA5SP400-201ENST00000517155 111 ntBASIC10.28□□□□□ -0.76
CFTRP13569 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC10.28□□□□□ -0.76
CFTRP13569 OR7E158P-201ENST00000524483 910 ntBASIC10.28□□□□□ -0.76
CFTRP13569 OR5D15P-201ENST00000531671 942 ntBASIC10.28□□□□□ -0.76
CFTRP13569 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC10.28□□□□□ -0.76
CFTRP13569 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC10.28□□□□□ -0.76
CFTRP13569 AL139407.1-201ENST00000613826 1175 ntBASIC10.28□□□□□ -0.76
CFTRP13569 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC10.28□□□□□ -0.76
CFTRP13569 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC10.28□□□□□ -0.76
CFTRP13569 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CFTRP13569 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC10.28□□□□□ -0.76
CFTRP13569 AC092692.1-201ENST00000623625 2595 ntBASIC10.28□□□□□ -0.76
CFTRP13569 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
CFTRP13569 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CFTRP13569 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC10.28□□□□□ -0.76
CFTRP13569 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC10.28□□□□□ -0.76
CFTRP13569 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
CFTRP13569 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.76
CFTRP13569 AL359091.1-201ENST00000449048 1734 ntBASIC10.27□□□□□ -0.76
CFTRP13569 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
CFTRP13569 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
CFTRP13569 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC10.27□□□□□ -0.77
CFTRP13569 AC105342.1-201ENST00000378334 6848 ntBASIC10.27□□□□□ -0.77
CFTRP13569 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CFTRP13569 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CFTRP13569 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
CFTRP13569 AC007842.1-201ENST00000597336 2039 ntBASIC10.27□□□□□ -0.77
CFTRP13569 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC10.27□□□□□ -0.77
CFTRP13569 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC10.27□□□□□ -0.77
CFTRP13569 AC100832.1-201ENST00000471945 383 ntBASIC10.27□□□□□ -0.77
CFTRP13569 SUMO2P7-201ENST00000511179 285 ntBASIC10.27□□□□□ -0.77
CFTRP13569 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC10.27□□□□□ -0.77
CFTRP13569 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC10.27□□□□□ -0.77
CFTRP13569 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CFTRP13569 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC10.27□□□□□ -0.77
CFTRP13569 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC10.27□□□□□ -0.77
CFTRP13569 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC10.27□□□□□ -0.77
CFTRP13569 Mico1.1-201ENST00000611698 204 ntBASIC10.27□□□□□ -0.77
CFTRP13569 AC092821.3-202ENST00000641304 2767 ntBASIC10.27□□□□□ -0.77
CFTRP13569 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
CFTRP13569 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
CFTRP13569 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CFTRP13569 OR10R3P-201ENST00000361688 942 ntBASIC10.26□□□□□ -0.77
CFTRP13569 RNA5SP211-201ENST00000365516 117 ntBASIC10.26□□□□□ -0.77
CFTRP13569 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC10.26□□□□□ -0.77
CFTRP13569 AC005297.1-201ENST00000444765 862 ntBASIC10.26□□□□□ -0.77
CFTRP13569 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CFTRP13569 OR7E116P-201ENST00000448529 957 ntBASIC10.26□□□□□ -0.77
CFTRP13569 RPL23AP60-201ENST00000450011 454 ntBASIC10.26□□□□□ -0.77
CFTRP13569 EIF1P7-201ENST00000487533 337 ntBASIC10.26□□□□□ -0.77
CFTRP13569 RN7SL808P-201ENST00000496066 299 ntBASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms