Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.75□□□□□ -1.33
TIMP1P01033 AL035661.1-201ENST00000620459 1144 ntBASIC6.75□□□□□ -1.33
TIMP1P01033 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.75□□□□□ -1.33
TIMP1P01033 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
TIMP1P01033 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TIMP1P01033 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
TIMP1P01033 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
TIMP1P01033 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TIMP1P01033 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC6.75□□□□□ -1.33
TIMP1P01033 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
TIMP1P01033 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TIMP1P01033 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC6.75□□□□□ -1.33
TIMP1P01033 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
TIMP1P01033 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC6.74□□□□□ -1.33
TIMP1P01033 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
TIMP1P01033 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.74□□□□□ -1.33
TIMP1P01033 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
TIMP1P01033 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
TIMP1P01033 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TIMP1P01033 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
TIMP1P01033 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TIMP1P01033 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TIMP1P01033 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.74□□□□□ -1.33
TIMP1P01033 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TIMP1P01033 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.74□□□□□ -1.33
TIMP1P01033 AC010624.4-201ENST00000597606 1351 ntBASIC6.74□□□□□ -1.33
TIMP1P01033 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TIMP1P01033 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.74□□□□□ -1.33
TIMP1P01033 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
TIMP1P01033 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.74□□□□□ -1.33
TIMP1P01033 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TIMP1P01033 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
TIMP1P01033 AC068138.1-201ENST00000412635 217 ntBASIC6.74□□□□□ -1.33
TIMP1P01033 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TIMP1P01033 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.74□□□□□ -1.33
TIMP1P01033 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.74□□□□□ -1.33
TIMP1P01033 GEMIN2P1-201ENST00000454246 752 ntBASIC6.74□□□□□ -1.33
TIMP1P01033 RPL32P9-201ENST00000487963 407 ntBASIC6.74□□□□□ -1.33
TIMP1P01033 SNORA70.20-201ENST00000516848 126 ntBASIC6.74□□□□□ -1.33
TIMP1P01033 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.74□□□□□ -1.33
TIMP1P01033 MIR4700-201ENST00000578311 74 ntBASIC6.74□□□□□ -1.33
TIMP1P01033 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.74□□□□□ -1.33
TIMP1P01033 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TIMP1P01033 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TIMP1P01033 FO393422.1-201ENST00000603908 708 ntBASIC6.74□□□□□ -1.33
TIMP1P01033 AL136295.6-201ENST00000610486 658 ntBASIC6.74□□□□□ -1.33
TIMP1P01033 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.74□□□□□ -1.33
TIMP1P01033 AC018445.2-201ENST00000622987 260 ntBASIC6.74□□□□□ -1.33
TIMP1P01033 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
TIMP1P01033 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TIMP1P01033 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TIMP1P01033 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
TIMP1P01033 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
TIMP1P01033 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TIMP1P01033 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC6.74□□□□□ -1.33
TIMP1P01033 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
TIMP1P01033 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.74□□□□□ -1.33
TIMP1P01033 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TIMP1P01033 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC6.74□□□□□ -1.33
TIMP1P01033 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
TIMP1P01033 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.73□□□□□ -1.33
TIMP1P01033 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.73□□□□□ -1.33
TIMP1P01033 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TIMP1P01033 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
TIMP1P01033 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TIMP1P01033 RNU1-19P-201ENST00000363306 165 ntBASIC6.73□□□□□ -1.33
TIMP1P01033 RN7SKP162-201ENST00000363605 345 ntBASIC6.73□□□□□ -1.33
TIMP1P01033 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
TIMP1P01033 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.73□□□□□ -1.33
TIMP1P01033 AL139415.1-201ENST00000424862 352 ntBASIC6.73□□□□□ -1.33
TIMP1P01033 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.73□□□□□ -1.33
TIMP1P01033 NANOGP4-201ENST00000427230 913 ntBASIC6.73□□□□□ -1.33
TIMP1P01033 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.73□□□□□ -1.33
TIMP1P01033 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.73□□□□□ -1.33
TIMP1P01033 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.73□□□□□ -1.33
TIMP1P01033 ZNF619P1-201ENST00000446539 752 ntBASIC6.73□□□□□ -1.33
TIMP1P01033 RANP2-201ENST00000456833 229 ntBASIC6.73□□□□□ -1.33
TIMP1P01033 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.73□□□□□ -1.33
TIMP1P01033 AL356801.1-201ENST00000559320 294 ntBASIC6.73□□□□□ -1.33
TIMP1P01033 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.73□□□□□ -1.33
TIMP1P01033 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
TIMP1P01033 RPL12P48-201ENST00000605620 304 ntBASIC6.73□□□□□ -1.33
TIMP1P01033 AC016769.4-201ENST00000616893 535 ntBASIC6.73□□□□□ -1.33
TIMP1P01033 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC6.73□□□□□ -1.33
TIMP1P01033 AC027279.4-201ENST00000624371 2072 ntBASIC6.73□□□□□ -1.33
TIMP1P01033 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.73□□□□□ -1.33
TIMP1P01033 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TIMP1P01033 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC6.73□□□□□ -1.33
TIMP1P01033 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC6.73□□□□□ -1.33
TIMP1P01033 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
TIMP1P01033 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
TIMP1P01033 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
TIMP1P01033 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TIMP1P01033 FLJ42393-201ENST00000623801 2270 ntBASIC6.73□□□□□ -1.33
TIMP1P01033 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.72□□□□□ -1.33
TIMP1P01033 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TIMP1P01033 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
TIMP1P01033 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TIMP1P01033 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
TIMP1P01033 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms