Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC2.61□□□□□ -1.99
USH2AO75445 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC2.61□□□□□ -1.99
USH2AO75445 CCNB1IP1P2-201ENST00000432876 818 ntBASIC2.61□□□□□ -1.99
USH2AO75445 Z84478.1-201ENST00000438230 1219 ntBASIC2.61□□□□□ -1.99
USH2AO75445 AURKAPS2-201ENST00000454983 333 ntBASIC2.61□□□□□ -1.99
USH2AO75445 AC004129.2-201ENST00000457229 287 ntBASIC2.61□□□□□ -1.99
USH2AO75445 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC2.61□□□□□ -1.99
USH2AO75445 RN7SKP83-201ENST00000516512 178 ntBASIC2.61□□□□□ -1.99
USH2AO75445 RNU4ATAC-201ENST00000580972 127 ntBASIC2.61□□□□□ -1.99
USH2AO75445 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC2.61□□□□□ -1.99
USH2AO75445 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC2.61□□□□□ -1.99
USH2AO75445 AC068724.3-201ENST00000625906 87 ntBASIC2.61□□□□□ -1.99
USH2AO75445 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
USH2AO75445 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
USH2AO75445 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
USH2AO75445 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC2.61□□□□□ -1.99
USH2AO75445 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
USH2AO75445 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC2.61□□□□□ -1.99
USH2AO75445 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC2.61□□□□□ -1.99
USH2AO75445 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC2.61□□□□□ -1.99
USH2AO75445 TNC-203ENST00000423613 6281 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
USH2AO75445 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
USH2AO75445 LOXHD1-207ENST00000441551 6226 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
USH2AO75445 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC2.61□□□□□ -1.99
USH2AO75445 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
USH2AO75445 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
USH2AO75445 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
USH2AO75445 ZMYND8-204ENST00000355972 5542 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
USH2AO75445 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC2.61□□□□□ -1.99
USH2AO75445 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
USH2AO75445 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
USH2AO75445 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
USH2AO75445 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC2.61□□□□□ -1.99
USH2AO75445 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
USH2AO75445 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC2.61□□□□□ -1.99
USH2AO75445 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC2.61□□□□□ -1.99
USH2AO75445 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
USH2AO75445 MIR134-201ENST00000385258 73 ntBASIC2.61□□□□□ -1.99
USH2AO75445 RN7SKP263-201ENST00000411194 309 ntBASIC2.61□□□□□ -1.99
USH2AO75445 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC2.61□□□□□ -1.99
USH2AO75445 RPL7P57-201ENST00000423238 740 ntBASIC2.61□□□□□ -1.99
USH2AO75445 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC2.61□□□□□ -1.99
USH2AO75445 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
USH2AO75445 RN7SL570P-201ENST00000484405 292 ntBASIC2.61□□□□□ -1.99
USH2AO75445 AC068790.7-201ENST00000602347 528 ntBASIC2.61□□□□□ -1.99
USH2AO75445 AL121890.2-201ENST00000617644 465 ntBASIC2.61□□□□□ -1.99
USH2AO75445 AC015722.2-201ENST00000622210 551 ntBASIC2.61□□□□□ -1.99
USH2AO75445 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
USH2AO75445 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC2.61□□□□□ -1.99
USH2AO75445 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
USH2AO75445 AC087516.1-201ENST00000561236 2428 ntBASIC2.61□□□□□ -1.99
USH2AO75445 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
USH2AO75445 TXLNB-201ENST00000358430 4753 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
USH2AO75445 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
USH2AO75445 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
USH2AO75445 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 ARHGAP19-201ENST00000358308 5390 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 AC007938.2-201ENST00000604666 2634 ntBASIC2.6□□□□□ -1.99
USH2AO75445 NLN-202ENST00000502464 8354 ntTSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC2.6□□□□□ -1.99
USH2AO75445 AC025750.1-201ENST00000399891 379 ntBASIC2.6□□□□□ -1.99
USH2AO75445 RPS7P8-201ENST00000418311 581 ntBASIC2.6□□□□□ -1.99
USH2AO75445 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC2.6□□□□□ -1.99
USH2AO75445 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC2.6□□□□□ -1.99
USH2AO75445 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC2.6□□□□□ -1.99
USH2AO75445 SNRPCP2-201ENST00000504370 475 ntBASIC2.6□□□□□ -1.99
USH2AO75445 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC2.6□□□□□ -1.99
USH2AO75445 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.6□□□□□ -1.99
USH2AO75445 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC2.6□□□□□ -1.99
USH2AO75445 AC021483.2-201ENST00000567415 758 ntBASIC2.6□□□□□ -1.99
USH2AO75445 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC2.6□□□□□ -1.99
USH2AO75445 AC233699.1-201ENST00000569955 1168 ntBASIC2.6□□□□□ -1.99
USH2AO75445 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC2.6□□□□□ -1.99
USH2AO75445 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
USH2AO75445 AL035555.1-201ENST00000404462 1790 ntBASIC2.6□□□□□ -1.99
USH2AO75445 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
USH2AO75445 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 AGPAT4-203ENST00000366911 7705 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 AC011493.1-201ENST00000596753 1632 ntBASIC2.6□□□□□ -1.99
USH2AO75445 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 PTGS1-205ENST00000540753 5375 ntTSL 2 BASIC2.6□□□□□ -1.99
USH2AO75445 AL022323.3-201ENST00000623888 5388 ntBASIC2.6□□□□□ -1.99
USH2AO75445 LRRC7-201ENST00000035383 5000 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
USH2AO75445 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 SNURFL-201ENST00000309296 343 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms