Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.65□□□□□ -1.34
TRIM38O00635 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
TRIM38O00635 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
TRIM38O00635 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM38O00635 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
TRIM38O00635 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM38O00635 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM38O00635 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM38O00635 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM38O00635 PARP4P1-201ENST00000435945 2337 ntBASIC6.65□□□□□ -1.34
TRIM38O00635 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM38O00635 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.65□□□□□ -1.34
TRIM38O00635 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM38O00635 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.65□□□□□ -1.34
TRIM38O00635 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM38O00635 RN7SKP86-201ENST00000410454 332 ntBASIC6.65□□□□□ -1.34
TRIM38O00635 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.65□□□□□ -1.34
TRIM38O00635 MTND4LP17-201ENST00000414607 293 ntBASIC6.65□□□□□ -1.34
TRIM38O00635 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM38O00635 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM38O00635 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.65□□□□□ -1.34
TRIM38O00635 ZNF736P1Y-201ENST00000440402 1276 ntBASIC6.65□□□□□ -1.34
TRIM38O00635 AL606490.8-201ENST00000441624 319 ntBASIC6.65□□□□□ -1.34
TRIM38O00635 RPS15AP29-201ENST00000445539 400 ntBASIC6.65□□□□□ -1.34
TRIM38O00635 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.65□□□□□ -1.34
TRIM38O00635 MEF2AP1-201ENST00000454867 863 ntBASIC6.65□□□□□ -1.34
TRIM38O00635 AC083806.1-201ENST00000468934 316 ntBASIC6.65□□□□□ -1.34
TRIM38O00635 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM38O00635 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
TRIM38O00635 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM38O00635 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.65□□□□□ -1.34
TRIM38O00635 SNRPCP6-201ENST00000528310 210 ntBASIC6.65□□□□□ -1.34
TRIM38O00635 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.65□□□□□ -1.34
TRIM38O00635 AC037479.1-201ENST00000558361 625 ntBASIC6.65□□□□□ -1.34
TRIM38O00635 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.65□□□□□ -1.34
TRIM38O00635 AC025283.1-201ENST00000572039 734 ntBASIC6.65□□□□□ -1.34
TRIM38O00635 MIR3154-201ENST00000577829 84 ntBASIC6.65□□□□□ -1.34
TRIM38O00635 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6.65□□□□□ -1.34
TRIM38O00635 MIR4310-201ENST00000582950 57 ntBASIC6.65□□□□□ -1.34
TRIM38O00635 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.65□□□□□ -1.34
TRIM38O00635 AL499605.1-201ENST00000604628 403 ntBASIC6.65□□□□□ -1.34
TRIM38O00635 AC011891.2-201ENST00000604949 397 ntBASIC6.65□□□□□ -1.34
TRIM38O00635 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM38O00635 AP001885.1-201ENST00000621658 558 ntBASIC6.65□□□□□ -1.34
TRIM38O00635 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
TRIM38O00635 AC073593.1-201ENST00000624500 411 ntBASIC6.65□□□□□ -1.34
TRIM38O00635 AC106730.3-201ENST00000624568 641 ntBASIC6.65□□□□□ -1.34
TRIM38O00635 SNX18P10-201ENST00000625014 519 ntBASIC6.65□□□□□ -1.34
TRIM38O00635 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM38O00635 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.65□□□□□ -1.35
TRIM38O00635 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
TRIM38O00635 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
TRIM38O00635 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
TRIM38O00635 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.65□□□□□ -1.35
TRIM38O00635 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.65□□□□□ -1.35
TRIM38O00635 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.65□□□□□ -1.35
TRIM38O00635 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
TRIM38O00635 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
TRIM38O00635 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
TRIM38O00635 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
TRIM38O00635 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
TRIM38O00635 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
TRIM38O00635 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM38O00635 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM38O00635 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM38O00635 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM38O00635 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.64□□□□□ -1.35
TRIM38O00635 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
TRIM38O00635 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM38O00635 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM38O00635 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM38O00635 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM38O00635 OLMALINC-203ENST00000641087 3779 ntBASIC6.64□□□□□ -1.35
TRIM38O00635 SNORD35A-201ENST00000363389 86 ntBASIC6.64□□□□□ -1.35
TRIM38O00635 RN7SKP47-201ENST00000365347 328 ntBASIC6.64□□□□□ -1.35
TRIM38O00635 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
TRIM38O00635 NPM1P38-201ENST00000403835 865 ntBASIC6.64□□□□□ -1.35
TRIM38O00635 AC013410.2-201ENST00000422627 201 ntBASIC6.64□□□□□ -1.35
TRIM38O00635 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM38O00635 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM38O00635 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM38O00635 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM38O00635 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM38O00635 MTCO3P43-201ENST00000440974 771 ntBASIC6.64□□□□□ -1.35
TRIM38O00635 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.64□□□□□ -1.35
TRIM38O00635 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM38O00635 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM38O00635 H3F3AP3-201ENST00000497682 407 ntBASIC6.64□□□□□ -1.35
TRIM38O00635 MTND6P8-201ENST00000503471 522 ntBASIC6.64□□□□□ -1.35
TRIM38O00635 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC6.64□□□□□ -1.35
TRIM38O00635 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC6.64□□□□□ -1.35
TRIM38O00635 AC093664.1-201ENST00000511779 289 ntBASIC6.64□□□□□ -1.35
TRIM38O00635 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM38O00635 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.64□□□□□ -1.35
TRIM38O00635 OR10D4P-201ENST00000525892 951 ntBASIC6.64□□□□□ -1.35
TRIM38O00635 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
TRIM38O00635 TDGP1-201ENST00000543961 1229 ntBASIC6.64□□□□□ -1.35
TRIM38O00635 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.64□□□□□ -1.35
TRIM38O00635 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM38O00635 OR1E3-201ENST00000575608 948 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms