Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 MIR6861-201ENST00000618657 64 ntBASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 AC127070.3-201ENST00000503695 3263 ntBASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
TBC1D3FA6NER0 AC022819.1-201ENST00000563495 3910 ntBASIC6.46□□□□□ -1.37
TBC1D3FA6NER0 MAPK10-323ENST00000641493 3207 ntBASIC6.46□□□□□ -1.37
TBC1D3FA6NER0 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
TBC1D3FA6NER0 AC007485.2-201ENST00000623493 1667 ntBASIC6.46□□□□□ -1.37
TBC1D3FA6NER0 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.46□□□□□ -1.37
TBC1D3FA6NER0 ABCA11P-202ENST00000504019 2110 ntBASIC6.46□□□□□ -1.37
TBC1D3FA6NER0 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
TBC1D3FA6NER0 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 RNU6-386P-201ENST00000362650 107 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 RNA5SP433-201ENST00000364491 114 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 OR6K3-202ENST00000368146 996 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 RN7SKP281-201ENST00000410472 352 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 AC002127.1-201ENST00000421305 225 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 AC092865.3-201ENST00000425390 1026 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 MTCO1P57-201ENST00000432182 261 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 MED28P4-201ENST00000433137 572 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 AC003989.1-201ENST00000434569 565 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 EMC3-AS1-205ENST00000438698 534 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 ZNF736P11Y-201ENST00000442535 1213 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 ZNF736P12Y-201ENST00000443152 1243 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 CXCR2P1-202ENST00000443392 1074 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 ZNF736P4Y-201ENST00000454995 1243 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 AC063943.2-201ENST00000495697 534 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 ZNF519P4-201ENST00000514008 125 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 AC106800.2-201ENST00000514009 1103 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 RNU6-943P-201ENST00000516960 98 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 AC104997.1-201ENST00000519761 717 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 DYNLL1P1-201ENST00000595442 269 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 RPSAP75-201ENST00000605848 301 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 AC025171.4-201ENST00000607250 1047 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 AC009032.1-201ENST00000617574 431 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 AP003789.1-201ENST00000617737 605 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 AP002371.2-201ENST00000624450 503 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 AC080188.3-201ENST00000624842 748 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 NEK2P4-201ENST00000425793 1329 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 AL512310.3-201ENST00000547023 1335 ntBASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.46□□□□□ -1.38
TBC1D3FA6NER0 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.45□□□□□ -1.38
TBC1D3FA6NER0 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TBC1D3FA6NER0 CASC19-243ENST00000641588 1546 ntBASIC6.45□□□□□ -1.38
TBC1D3FA6NER0 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
TBC1D3FA6NER0 MTND4P21-201ENST00000453886 1357 ntBASIC6.45□□□□□ -1.38
TBC1D3FA6NER0 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.45□□□□□ -1.38
TBC1D3FA6NER0 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
TBC1D3FA6NER0 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.45□□□□□ -1.38
TBC1D3FA6NER0 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TBC1D3FA6NER0 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TBC1D3FA6NER0 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
TBC1D3FA6NER0 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms