Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AC022165.1-201ENST00000568771 596 ntTSL 5 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 MIR4528-201ENST00000577763 90 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AC015871.2-201ENST00000603605 948 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AL445670.1-201ENST00000618889 801 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AL359834.1-201ENST00000635660 638 ntTSL 4 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 CDC25C-203ENST00000415130 1556 ntTSL 5 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AC036108.4-201ENST00000611654 2516 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 PCDH18-205ENST00000511115 1331 ntTSL 2 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 SVBP-201ENST00000372521 658 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 GPN2-201ENST00000374133 715 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AL672167.2-201ENST00000377164 879 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 RNA5SP256-201ENST00000390978 113 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 Y_RNA.582-201ENST00000391023 95 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 SNORD115-47-201ENST00000391226 86 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AL138807.1-201ENST00000400354 459 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AC005999.1-201ENST00000414409 588 ntTSL 4 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 MEAF6P1-201ENST00000416092 327 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 TRIM43CP-201ENST00000422468 1028 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AL049758.1-201ENST00000423154 397 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 RPL7P44-201ENST00000424827 742 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AL050402.1-201ENST00000440477 770 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AC018738.1-201ENST00000441378 210 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AC107983.1-201ENST00000442562 210 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 OR6C5P-201ENST00000452388 923 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 CALM1P2-201ENST00000452941 448 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 RPS6P25-201ENST00000464444 748 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AC007547.2-201ENST00000468802 360 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 RPS3AP17-201ENST00000472594 777 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 UBTFL6-201ENST00000477929 1024 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 VPS26AP1-201ENST00000483197 979 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AC108688.1-201ENST00000485817 713 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AL358832.1-201ENST00000497800 389 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 RN7SKP190-201ENST00000516079 286 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 ERLIN2-210ENST00000523107 771 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AC007751.2-201ENST00000534173 291 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 OR7K1P-201ENST00000546439 926 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms