Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RN7SKP47-201ENST00000365347 328 ntBASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 HNRNPH1P2-201ENST00000396845 1210 ntBASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 AL049545.1-201ENST00000401856 572 ntBASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 HMGB3P19-201ENST00000403971 560 ntBASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 AL451061.1-201ENST00000407887 862 ntBASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 RNU4-27P-201ENST00000410889 139 ntBASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 RMRPP5-201ENST00000411156 267 ntBASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 AC096533.1-201ENST00000411645 353 ntBASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 AL158050.1-201ENST00000416077 457 ntBASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 AL355355.1-201ENST00000442900 793 ntBASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 AL356133.1-201ENST00000444762 372 ntBASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 ST13P21-201ENST00000453250 1098 ntBASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 AL354872.1-201ENST00000456361 967 ntBASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 RN7SL379P-201ENST00000479912 293 ntBASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 MTCYBP35-201ENST00000503630 1137 ntBASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 CFI-204ENST00000510800 667 ntTSL 2 BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 AC114940.1-201ENST00000512162 1265 ntBASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 NXPE2P1-201ENST00000543705 726 ntBASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 MIR4428-201ENST00000584884 73 ntBASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 RPS27AP19-201ENST00000597285 458 ntBASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 AC026741.1-201ENST00000605892 482 ntBASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 AC021851.1-201ENST00000608537 1082 ntBASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.15□□□□□ -1.27
PPARGC1AQ9UBK2 AL359195.2-201ENST00000623657 4412 ntBASIC7.15□□□□□ -1.27
PPARGC1AQ9UBK2 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
PPARGC1AQ9UBK2 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
PPARGC1AQ9UBK2 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
PPARGC1AQ9UBK2 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
PPARGC1AQ9UBK2 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.15□□□□□ -1.27
PPARGC1AQ9UBK2 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
PPARGC1AQ9UBK2 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 ZNF29P-201ENST00000225587 168 ntBASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 AL589994.1-201ENST00000404962 340 ntBASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 OR51B3P-201ENST00000412287 913 ntBASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 RANP4-201ENST00000413361 655 ntBASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 BX664727.1-201ENST00000416024 466 ntBASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 MEAF6P1-201ENST00000416092 327 ntBASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 YWHAZP5-201ENST00000419975 730 ntBASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 TEX41-203ENST00000420472 765 ntTSL 3 BASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 AC115285.1-201ENST00000424879 736 ntBASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 AC092646.1-201ENST00000427142 901 ntBASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 PHB2P1-201ENST00000434943 890 ntBASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 RBMY2EP-202ENST00000456360 940 ntBASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 AL096803.1-201ENST00000456921 1021 ntBASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 NMNAT1P3-201ENST00000457517 888 ntBASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 RPS26P11-201ENST00000463445 348 ntBASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 PGBD4P1-201ENST00000473644 407 ntBASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 RPS26P6-201ENST00000475156 348 ntBASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 PPP1R2P6-201ENST00000478565 588 ntBASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 AC135999.1-201ENST00000478962 479 ntBASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 RN7SL868P-201ENST00000485915 303 ntBASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 AC023818.1-201ENST00000498379 384 ntBASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 RNU6-311P-201ENST00000516224 102 ntBASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.14□□□□□ -1.27
PPARGC1AQ9UBK2 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms