Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.88□□□□□ -1.15
CNTN3Q9P232 AP000619.2-201ENST00000546014 969 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 AC126177.6-201ENST00000550420 1009 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 NPM1P5-201ENST00000557228 838 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 FAM30C-201ENST00000561158 410 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC7.88□□□□□ -1.15
CNTN3Q9P232 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC7.88□□□□□ -1.15
CNTN3Q9P232 MIR5010-201ENST00000582846 120 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 MIR3159-201ENST00000584572 74 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC7.88□□□□□ -1.15
CNTN3Q9P232 AP002906.1-201ENST00000603405 233 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 COX6CP16-201ENST00000603667 216 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 AC005377.1-201ENST00000605126 456 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC7.88□□□□□ -1.15
CNTN3Q9P232 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC7.88□□□□□ -1.15
CNTN3Q9P232 AC211433.3-201ENST00000623770 375 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 AC093909.6-201ENST00000624757 775 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CNTN3Q9P232 MBD5-221ENST00000637159 902 ntTSL 5 BASIC7.88□□□□□ -1.15
CNTN3Q9P232 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CNTN3Q9P232 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTN3Q9P232 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.88□□□□□ -1.15
CNTN3Q9P232 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC7.88□□□□□ -1.15
CNTN3Q9P232 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.88□□□□□ -1.15
CNTN3Q9P232 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTN3Q9P232 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTN3Q9P232 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CNTN3Q9P232 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 AL359715.4-201ENST00000606629 1436 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 AC092451.3-201ENST00000625067 1343 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 RNA5SP35-201ENST00000391257 129 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 GTF2IP2-201ENST00000424290 697 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 PIP5K1P2-201ENST00000437005 1120 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 RPS19P6-201ENST00000441327 433 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 CYCSP42-201ENST00000450823 238 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 NDUFAF4P4-201ENST00000454883 502 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 AC096922.1-201ENST00000461635 651 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 RPL23P10-201ENST00000468780 412 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 AF305872.1-201ENST00000485217 471 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 EIF4E2P2-201ENST00000492033 736 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 RPL5P11-201ENST00000498068 893 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 CFI-204ENST00000510800 667 ntTSL 2 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 IGLVI-42-201ENST00000522485 381 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 AC090115.2-201ENST00000548060 883 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 AC016144.1-201ENST00000548175 1087 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 AC010327.2-201ENST00000587647 488 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 AP001269.3-201ENST00000588718 329 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 AP003392.5-201ENST00000607857 415 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 AC005277.2-201ENST00000617898 390 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 AL590240.3-201ENST00000621416 943 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 AC092656.1-203ENST00000624134 423 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 AC243725.1-201ENST00000637164 436 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 ZNF849P-201ENST00000594711 1566 ntBASIC7.87□□□□□ -1.15
CNTN3Q9P232 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms